| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2030 |
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| Symbol | |
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| ID | 4598652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2174177 |
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| End bp | 2175616 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639776634 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_923227 |
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| Protein GI | 119716262 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGA AGGACTGGAG CAAGAAGACC AGCGATGCGC CGGAGGGGCT TCGTCGGCAG
TGGCGTGCTG ATCGGGCGCT GAGGCCGGCG ATGCGCTCGC CCGGGCGACC GGACCCGTCG
CGGGTGGTGC AGCGACAGTT CTGGCGGCAG ATCGCCACGG GCGTCACGAC GGTGGAGGCG
TCGATGGCCG TGGGCGTGTC GTGGCCGGTC GGTGCTCGCT GGTTTCGCCA CGCTGGCGGC
ATGCCGCCGA TCTCGCTGGC CGAGCCCACC GGCCGCCACC TGACCTTCGA GGAACGCGAG
GAGATCGCGA TCCTGCGCGC CAAGGACAAG GGCGTGCGCG AGATAGCCCG TGCGATCGGG
CGTGACCCGG GGACCGTCTC ACGCGAACTT CGTCGCAATG CAGCGACTCG TGGCGGCAAG
CAGGAGTACC GCGCTGGCGT AGCGCAGTGG AAGGCACAGC AGGCGGCGAA GCGTCCCAAG
ACCGCGAAGC TCGTGACCAA CGAGCGGTTG CGTGAGTACG TGCAGGATCG GCTCGCCGGC
AACGTCCGCC GTCCCGACGG CACGATCGTG CCGGGTCCGA CACCGCCGCC GTGGAAGGGC
CTGAACAAGC CGCATCGCCG GGACAGGCGG TGGTCGACGG CTTGGAGCCC GGAGCAGATC
GCCCAGCGCC TGAAGGTCGA GTTCCCCGAT GATGAGTCCA TGCGCATCAG CCACGAGGCG
ATCTACCAGT CGCTGTTCAT CGAGGGCCGC GGTGCGCTCA AGCGCGAACT GGTCACCTGT
CTGCGCACCG GGCGTGCGCT GCGGGAGCCG CGGGCCCGGT CACGGAACAA GGCACAGGGG
CACGTGACCG CCGATGTCGT TCTCAGCGAG CGCCCCGCTG AGGCAGACGA CCGGGCCGTC
CCTGGCCACT GGGAGGGCGA TCTGATCATC GGCACGGGTC GGTCTGCGAT CGGCACCCTC
GTCGAGCGCA GCAGTCGCTC AACGCTCCTG GTCCATCTGC CGCGACTGGA GGGCTGGGGT
GAGAAGCCGT ACGTCAAGAA CGGGCCATCA CTCGGTGGCT ACGGGGCCGT CGCGATGAAC
ACCGCGCTGA CCGCGTCGAT GACCAAGCTG CCCGAGCAGC TGCGCAAGAC CCTGACGTGG
GACCGTGGCA AGGAACTCTC GGGCCACGCG TTGTTCGCGG TGGCGACCGG CACGAAGGTG
TTCTTCGCCG ACCCGCACTC GCCGTGGCAG CGACCGAGCA ACGAGAACAC CAACGGCCTG
TTGCGCCAAT ACTTCCCCAA GGGCACCGAC CTGTCGCGCT GGTCCGCCGA GGACCTGGAG
GCCGTCGCCT ATGCGCTCAA CAACCGGCCC CGCAAGGTCC TCGGGTGGAA GACACCCGCT
GAGGTCTTCG AGGAGCAACT ACGCTCCCTT CAACAACCCG GTGTTGCATC GACCAGTTGA
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| Protein sequence | MATKDWSKKT SDAPEGLRRQ WRADRALRPA MRSPGRPDPS RVVQRQFWRQ IATGVTTVEA
SMAVGVSWPV GARWFRHAGG MPPISLAEPT GRHLTFEERE EIAILRAKDK GVREIARAIG
RDPGTVSREL RRNAATRGGK QEYRAGVAQW KAQQAAKRPK TAKLVTNERL REYVQDRLAG
NVRRPDGTIV PGPTPPPWKG LNKPHRRDRR WSTAWSPEQI AQRLKVEFPD DESMRISHEA
IYQSLFIEGR GALKRELVTC LRTGRALREP RARSRNKAQG HVTADVVLSE RPAEADDRAV
PGHWEGDLII GTGRSAIGTL VERSSRSTLL VHLPRLEGWG EKPYVKNGPS LGGYGAVAMN
TALTASMTKL PEQLRKTLTW DRGKELSGHA LFAVATGTKV FFADPHSPWQ RPSNENTNGL
LRQYFPKGTD LSRWSAEDLE AVAYALNNRP RKVLGWKTPA EVFEEQLRSL QQPGVASTS
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