Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2019 |
Symbol | |
ID | 4598641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2162401 |
End bp | 2164926 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639776623 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_923216 |
Protein GI | 119716251 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00459182 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACGG ACCAGTTCGC CCGGGTCGCC GTACCCGCTC GCGAGCTGGA CCTGACCCTC CTCGGCGGCC ACCCCGACGA CCCCGCGCTC GTCACCGGCG ACCGCACGGT GACCTACGCC GAGCTGGCCG CGCTCGTGCA GCGCCGCGCG CTCGAGCTCG ACGACCCGGG CCGGCTGCTG CTGCTCGAGA TGGCCAACGA CCTGCCCAGC GTCGTGACCT ACCTGGCCGC CCTCGCGCTC CACCGCCCCG TGGTGATCGC CACCCCCGGC GCGCACGACG ACATCGCCCG GACCTACCGG CCGGCGCTGG ACGCCGACGC CCCGCCGCCG CTGCACCCCG ACCTGGCCGT GCTGCTGTCG ACCTCGGGCT CCACTGGCTC ACCCAAGCTG GTCCGGCTCT CCCGCGCCAA CGTGGTCGCC AACGCGCGGA GCATCGCCGA CTACCTCGGC ATCCGCCGCT CCGACCGGGC GCTCACCTCG CTCCCCCTGC ACTACTGCTA CGGCCTCTCG GTGCTCAACA GCCACCTGGT CGCCGGGGCC GCGGTGGTGC TGACCGACCT GTCGGTGGCC GACGAGTGCT TCTGGGACCT GGCCCGCACC CACCGGGCGA CGACGTTCGC CGGCGTCCCC TACACGTTCG ACCTGCTGGA CGCGACCGGC TTCGCCGACC GCGACCTGCC GCACCTGCGC TACGTCACCC AGGCCGGCGG CCGGCTCGCG CCCGAGACGG TGGTGCGGTA CGCCGAGCTC GGGCAGCGCC GCGGCTGGGA CCTGTTCGTG ATGTACGGCC AGACCGAGGC CACCGCCCGG ATGGCGTACC TGCCGCCCAC GCTGGCGCCG ACCCGGCCGG AGGCGATCGG GGTCGCCGTA CCGGGGGGGA CGCTGCGGGT GGACCTGGAC GGGCCCGGCC GCGAGGGCCT GCCCGCGGAC GTCGGCGAGC TCGTCTACGG CGGCCCGAAC GTGATGATGG GCTACGCCCA CGGGCCCGCG GACCTGGCCC GGGGCGCCGA GCTGACCGAG CTGCGCACCG GCGACCTGGC CCGGCGCGGT CCGGACGGGC TGTGGGAGGT CGTCGGCCGG CTGAACCGCA CCGCCAAGGT GTTCGGCCTG CGGCTCGACC TCGACCGGAT CGAGCGCCGG CTGGCCACCG CGGGTGCCCC GGCGCGGGCA GTGGTCGTCG GCGAGGGCCT GCACCTGTTC ACGACCCGGC CCCGCGACCG GCGCGTGCTG CCCACCCACC TGGCGCGGAT CGCCGGCATC CCGGCCGGCA CCGTGACCGC CCACGTGGTC GAGACCGTGC CGACGACCGC GTCCGGCAAG TGCGACTACG CCGCGCTGCG CCGCCAGGCC GAGGCCGCGC TCGCGCTGGC CGAGCCGGAC GCCGGATCCG AGGCGGCGCC GGCGTACGGC GACGTCACCG GCCTGCGCGA CCTGTACGCC GTCCTCCTCG GCCGCCCGGA CGCCACCGCG CAGGACACCT TCGTCGGGCT CGGCGGCGAC TCGCTGTCCT TCGTCGAGCT CTCGACCCGG CTCGCGGCCC GGATCGGACA CCTGCCCGCG GACTGGCCGC ACCGGTCGAT CGAGTCACTG GCCCTGGAGT CCCGGCCGGC CCGCCGGTTC ACGACGCCGG TCGAGCTCGG CGTCGTGCTG CGGGCCGTGG CGATCATCCT GATCGTCGTC ACGCACGTCG ACGTCGTGCA CCTGCTCGGC GGGGCGCACG TGCTGCTCGC GCTGGTCGGC TACCACCTGG CCCGGTTCGG CCTGGCCGTC GACGGGCGGC GGACCCGGAC CCGGCGGCTG CTCGTCGGCC TGGCCGGGGT CGCCGTTCCT GCCTCGCTGT GGATCGGCGG CGCCGCCCTC CTCACCGGGG AGTACCGCCC GGCCACGGCG CTGTACCTCA ACGGCGTGGT CGGCGAGAGC CGGTGGAGCG ACGACTGGCA GTTCTGGTTC CTCGACGTGC TGGTCTGGGG CACGCTCGCG GTCGCCCTGG CGCTCGCGGT GCCGTGGGTG GACCGCCGCC AGCGGCGCTC GCCGTACGCC GTCGCGCTGG TGGCGCTCGT GGCCGCCCTG GGGCTGCGCT ACGCCACCGT CGGGGTGAGC GCGGACCTGA CCGAGAAGTA CACCGTGGCC GGCAGCCTGT GGCTGATCGC GCTCGGGTGG GCGGTCGCGG AGGCGCGCAC CCGGACCCAG CGGCTGGTGG TCGCGGCGGT CGCGGCGCTC GGGCTGGTGG GGTTCTTCCC CGGCGAGCCG AGTCGTACGG CGATCGTCGG CATCGGCGTG CTCCTGCTGC TGTGGGCCCG ACCCGTGCCG GTCCCCACGG TCCTGGCCGC GCCGCTGCGC GTGGTCGCGG GCGCGTCGCT GTGGATCTAC CTGACGCAGT GGCAGGTCTA CCCCGGGCTC GAGGCGGCCG GGCGGCCCGC GCTCGCGATC GGCGCCTCGC TGGCGGTGGG CGTGGCGTGC TGCTGCGCCT ACACCCGGCT GGAGCGGGCG GTGCGGCCGC GGCTCAGCAG GAGACGCCGA GGCTGA
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Protein sequence | MTTDQFARVA VPARELDLTL LGGHPDDPAL VTGDRTVTYA ELAALVQRRA LELDDPGRLL LLEMANDLPS VVTYLAALAL HRPVVIATPG AHDDIARTYR PALDADAPPP LHPDLAVLLS TSGSTGSPKL VRLSRANVVA NARSIADYLG IRRSDRALTS LPLHYCYGLS VLNSHLVAGA AVVLTDLSVA DECFWDLART HRATTFAGVP YTFDLLDATG FADRDLPHLR YVTQAGGRLA PETVVRYAEL GQRRGWDLFV MYGQTEATAR MAYLPPTLAP TRPEAIGVAV PGGTLRVDLD GPGREGLPAD VGELVYGGPN VMMGYAHGPA DLARGAELTE LRTGDLARRG PDGLWEVVGR LNRTAKVFGL RLDLDRIERR LATAGAPARA VVVGEGLHLF TTRPRDRRVL PTHLARIAGI PAGTVTAHVV ETVPTTASGK CDYAALRRQA EAALALAEPD AGSEAAPAYG DVTGLRDLYA VLLGRPDATA QDTFVGLGGD SLSFVELSTR LAARIGHLPA DWPHRSIESL ALESRPARRF TTPVELGVVL RAVAIILIVV THVDVVHLLG GAHVLLALVG YHLARFGLAV DGRRTRTRRL LVGLAGVAVP ASLWIGGAAL LTGEYRPATA LYLNGVVGES RWSDDWQFWF LDVLVWGTLA VALALAVPWV DRRQRRSPYA VALVALVAAL GLRYATVGVS ADLTEKYTVA GSLWLIALGW AVAEARTRTQ RLVVAAVAAL GLVGFFPGEP SRTAIVGIGV LLLLWARPVP VPTVLAAPLR VVAGASLWIY LTQWQVYPGL EAAGRPALAI GASLAVGVAC CCAYTRLERA VRPRLSRRRR G
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