Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1995 |
Symbol | |
ID | 4598310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2134101 |
End bp | 2135726 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639776598 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_923192 |
Protein GI | 119716227 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCCAGG TTGTGCTCCA GAAGGCCCGC GCCGGCGCCA CCGCGACCGG CACCACCCTC AAGGTCCTCG GCGAGGCCGG GGTCATCCGA CCCCGCAACC CCGTCGCCCT CGCCAAGGTG GCCAAGGCGC TCAAGGACTG GGGGACCGGC CCGGCCGGGG GCTTCACGGC CGCGGCGCTG CTCGACCCGC GGCGCACCGC GATCATCGAC GAGCTCGGCT CGCTGACCTT CGCCGAGCTG CAGCGCCGGT CGAACGCGCT CGCCCGGGCC TTCGCCGAGC TCGGTGTCTC CGAGGGCGAC AGCGTGGCGC TGATGTGCCG CAACCACCGC GGCTTCGTCG AGGCGAGCAT CGCCGCCGCC AAGCTCGGCG CGGACATCTT GTACCTCAAC ACCGCGTTCG CGGGCCCCCA GCTGGTGGAG GTGCTCGAGC GTGAGCAGCC CGCCCTGGTG GTCCACGACG AGGAGTTCAC CCGGCTGCTC GCCAAGGCCG ACGTCGGTAC GTCGGTCCTC GCCTGGACCG ACTCCGCCGA CTCCGACGAC TCTGCCGACC CCACCCTGGA GTCCCTGATC GCCGGCCGCT CCGGCGCCGA CCTGGAGCCC ACCGGGCGGC ACGGCCGGAT CGTGATCCTG ACCTCGGGCA CCACCGGCAC CCCCAAGGGG GCGCCGCGCA GCGAGGCCGG CATCGACGCG GCCGTGTCGC TGCTCTCCCG GATGCCGCTG CGCTACGGCT GGCGCACCCA CATCGCCGCG CCGCTGTTCC ACACCTGGGG TTTCGCGCAC CTGGCGCTGG CGATGCTGCT CGGCTCGACG ATCGTGCTGC GCCGCCGCTT CGACCCGGAG GCCTGCCTGC GCGCCACCCA GGACGAGCGG TGCGACTCAC TGGTGGTGAT CCCGGTGATG CTGCAGCGGA TGATGGCGCT GCCCGAGGAG ACGCTCGCCC GGTACGACCT CTCCCGGGTG CAGGTCGTCG CGTCGTCGGG CTCGGCGCTG CCGGGGGATC TGGCCACCGA CTGGATGGAC CACTTCGGCG ACCACCTCTA CAACATCTAC GGCTCCACCG AGGTCGCCTA CGCGTCCATC GCGACGCCCC TCGACCTGCG CGAGGCACCG TCGGCCGCCG GGAAGCCGCC GTACGCCACG ATCGTCAAGA TCCTCGACCC CGACGGCCGC GAGCTGCCGC AGGGGGAGAC CGGGCGGATC TTCGTCGGCA ACGGGCTGTT GTTCGAGGGC TACACCGGCG GCGGGCACAA GGAGGTCGTC GACGGGCTGA TGTCGACCGG CGACGTCGGG CGGTTCGACA CCGACGGGCG GCTGCACGTC GAGGGCCGCG ACGACGAGAT GATCGTGTCC GGCGGCGAGA ACGTCTTCCC CAAGGAGGTC GAGGACTGCC TGATGCGCCA CGACGCGGTC GTCGAGGTCG CCGCGGTCGG CGTGGACGAC CCCGATTTCG GCAAGCGGTT GCGCGCGTTC GTCGTCGTCA GCCGGGCCGT GCCCGAGCAG GAGCTGAAGG ACTGGGTGAA GGAGAACCTG GCCCGCTACA AGGTCCCGCG CGACGTCGTG TTCCTCGACG AGCTGCCCCG CAACGCCACC GGGAAGGTGC TCAAGCGCGA CCTCGACACC GCCTGA
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Protein sequence | MLQVVLQKAR AGATATGTTL KVLGEAGVIR PRNPVALAKV AKALKDWGTG PAGGFTAAAL LDPRRTAIID ELGSLTFAEL QRRSNALARA FAELGVSEGD SVALMCRNHR GFVEASIAAA KLGADILYLN TAFAGPQLVE VLEREQPALV VHDEEFTRLL AKADVGTSVL AWTDSADSDD SADPTLESLI AGRSGADLEP TGRHGRIVIL TSGTTGTPKG APRSEAGIDA AVSLLSRMPL RYGWRTHIAA PLFHTWGFAH LALAMLLGST IVLRRRFDPE ACLRATQDER CDSLVVIPVM LQRMMALPEE TLARYDLSRV QVVASSGSAL PGDLATDWMD HFGDHLYNIY GSTEVAYASI ATPLDLREAP SAAGKPPYAT IVKILDPDGR ELPQGETGRI FVGNGLLFEG YTGGGHKEVV DGLMSTGDVG RFDTDGRLHV EGRDDEMIVS GGENVFPKEV EDCLMRHDAV VEVAAVGVDD PDFGKRLRAF VVVSRAVPEQ ELKDWVKENL ARYKVPRDVV FLDELPRNAT GKVLKRDLDT A
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