| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1925 |
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| Symbol | |
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| ID | 4596372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2052035 |
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| End bp | 2052883 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639776523 |
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| Product | sigma-70 region 4 domain-containing protein |
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| Protein accession | YP_923122 |
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| Protein GI | 119716157 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.31103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGT TGCCCGCCCC CTCCACCGAC GCTCCTCCGG ACCGGCTCGA CCCGAGCCTG
GACCCCACGC GGGACCCCGA CTGCGGCCTG ACCCGCCCCG AGCGCGCCGA GCACACGGCG
CGCCTGCTCG ACGAGGCCCA GCACAGCGAC GACGCAGGCG AGCGCGAGGA GGTGCTCGGC
CGGGTCGTCG TGATCAACCG CGGTGTCGCG GATGCGGTCG CCGCCCGGTT CCGCAACCGC
GGGATCCCCC AGGAGGACCT GCGCCAGGTC GCCTACGAGG GCCTGACCAA GGCCGTGCAC
CGGTTCGACC CCGAGCTGCG CAACGACCTG CTCACCTACG CCGTCCCCAC CATCCGCGGC
GAGCTGCAGC GCTACTTCCG CGACCAGGGC TGGACGGTGC GGCCCCCGCG GCGCATCCAG
GAGCTCCAGT GGCGGGTGAA CCAGGTGATC GAGCGGCTCA CCCAGGAGCG CGGCCGGGAG
CCCTCCGAGG ACGAGATCGC CGCCGAGCTC GACACCACGG TCGAGGAGTA CCGCGACGCC
GCCTCGGCCT TCGGCTGCTT CCAGCCCACC TCCCTCGACC AGCCAGTGGG CCACGAGGGC
GAGACTCCGG TCGGCGAGCT GATCGCCGGT GCGGACGCCG ACGGGCCCGC GACCGAGGCC
CGGATGCTGC TCGCGCCCGT CGTACGCCGG CTCCCCGAGC GGCACCGCCG GATCCTCTAC
CTGCGGTTCT TCGAGGACCT CACCCAGGAG GAGATCGGCC GCGACCTCGG CGTCACCCAG
ATGCAGGTCT CGCGCCTGCT CAGCCGGATC CTCGGGGACC TCAGGGACGA GCTCAAGGAG
GCCGGGTGA
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| Protein sequence | MTTLPAPSTD APPDRLDPSL DPTRDPDCGL TRPERAEHTA RLLDEAQHSD DAGEREEVLG
RVVVINRGVA DAVAARFRNR GIPQEDLRQV AYEGLTKAVH RFDPELRNDL LTYAVPTIRG
ELQRYFRDQG WTVRPPRRIQ ELQWRVNQVI ERLTQERGRE PSEDEIAAEL DTTVEEYRDA
ASAFGCFQPT SLDQPVGHEG ETPVGELIAG ADADGPATEA RMLLAPVVRR LPERHRRILY
LRFFEDLTQE EIGRDLGVTQ MQVSRLLSRI LGDLRDELKE AG
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