Gene Noca_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1893 
Symbol 
ID4596394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp2020069 
End bp2020725 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content73% 
IMG OID639776491 
ProductMOSC domain-containing protein 
Protein accessionYP_923090 
Protein GI119716125 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.552866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTCG TGGGCATCCT GCACTCCGTC AACGTGGGCC GCGACCGGGA CGCGCCGTAC 
GCGAACCTGG GGCACTCCGG CATGAACAAG CAGCCGGTCG CGGGCCGGGT GGCCGTGCGC 
GCCCTCGGAC TCGACGGGGA CCAGGTGGGC GACACCGTCC ACCACGGTGG CGTCGACCAG 
GCGGTGTACG TCTTCGCCCG CGAGGACCTG GACCGGTGGG CGGTCGAGCT CGGGCAGGAC 
ATCCGGGACG GGATGTTCGC GGAGAACCTC ACCACCCGGG GCATCGACGT CAACGAGGCC 
GAGGTCGGGG AGCGGTGGCG GATCGGCACC GCGGAGCTCG AGGTCGCCAG CGTGCGGATC 
CCGTGCAACG ACTTCAAGAG CTGGATGGGC GTGGGCGGCT ACGACAACCG GGCCTGGGTG 
AAGCGGTTCG CCGCCACCGG GCGGCCCGGG CCCTACCTGC GGGTGCTCGT GGAGGGCGAG 
GTCGGTGCCG GCGACGAGAT CGCGGTGGTC CACCGGCCCG GGCACGGGGT CACGGTGTCG 
ACGATGTTCC GGGCGCTGAC GACCGAGACC GACCTGCTGC CGGACCTCCT GCGCGTCGAG 
GGACTGGTCG AGCAGGCCCG GGTGACGGCC GAGAAGTACG TCGCGGCGCG CGGCTGA
 
Protein sequence
MAVVGILHSV NVGRDRDAPY ANLGHSGMNK QPVAGRVAVR ALGLDGDQVG DTVHHGGVDQ 
AVYVFAREDL DRWAVELGQD IRDGMFAENL TTRGIDVNEA EVGERWRIGT AELEVASVRI 
PCNDFKSWMG VGGYDNRAWV KRFAATGRPG PYLRVLVEGE VGAGDEIAVV HRPGHGVTVS 
TMFRALTTET DLLPDLLRVE GLVEQARVTA EKYVAARG