Gene Noca_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1660 
Symbol 
ID4600039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1764517 
End bp1765302 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content75% 
IMG OID639776259 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_922860 
Protein GI119715895 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.74426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCGTG AGCGTCGCAG CACTCCGCTG GCGAGCACCT GCACGGCCCC GCACACCTGC 
CCGCGTCCGT TGCGGCTCGA CGTGTTGTCC CACGCGCCGT ACTTCGCCGG CCTGAGCCGC
GAGGAGATCA TCGCGCTCGA CGAGGCGGCC AAGGTCCGCG GCTACACCGA GGGCGAGGCC
ATCTACCACG CGGGCGGCTC CGCGGAGCAC CTGTTCCTGC TGGCGTCGGG CCGGGTCAAG
GTGCTGCGGC CCGCGCTGGA CGACTCCGAC GTGCTGGTCG AGGTGATCAC CCCCGGGGCG
ACGTTCGGCT CGGTCGCCGC GCTCGGCCAC TCGACGTACC CCGACACCGC GATGGCCCTG
ACCGTCAGCT GCGTGCTGCG GATCTCGGCC GCCGACCTCC GCCGGGTGAT GAACCGGCAC
CCGGCCGTCG CCCTGGCCGT CCTGGACGAG GTGTCGCACC GGCTCGAGGA GGCCCAGCAG
ACCGTCCGGC GGCTCTCCGG CGGCACCGTC GAGCAGCGGG TCGCCTCGTC CCTGCTCGTC
CTCGCCGACC AGCTGGGCGA GCCGCGGGAC GGCGGCGTGC TCCTGCAGCT GCCGCTGACC
CGCGAGGACC TCGCGTCCAT GACCGGCACC ACCACCGAGT CGGTGAGCCG GACGCTGAGC
AAGTGGCGCC GCGCCGGCCT GATCGAGACC GGGCGACGCT GGACCTCTCT CACCGACCGG
GCCGCGCTCG CGGCGATCGC CGGGGCCGCC CACGGCCCGG GTCCGGTCCG CGCCCGACGC
GGCTGA
 
Protein sequence
MARERRSTPL ASTCTAPHTC PRPLRLDVLS HAPYFAGLSR EEIIALDEAA KVRGYTEGEA 
IYHAGGSAEH LFLLASGRVK VLRPALDDSD VLVEVITPGA TFGSVAALGH STYPDTAMAL
TVSCVLRISA ADLRRVMNRH PAVALAVLDE VSHRLEEAQQ TVRRLSGGTV EQRVASSLLV
LADQLGEPRD GGVLLQLPLT REDLASMTGT TTESVSRTLS KWRRAGLIET GRRWTSLTDR
AALAAIAGAA HGPGPVRARR G