| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1631 |
|---|
| Symbol | |
|---|
| ID | 4600010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1731439 |
|---|
| End bp | 1732392 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639776230 |
|---|
| Product | aspartate carbamoyltransferase |
|---|
| Protein accession | YP_922831 |
|---|
| Protein GI | 119715866 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.329226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGCT TCCTGGGCCG CGACATCCTG TCCCTGAAGG ACGTCGAGCG CGACGACTAC
TTCCGGATCT TCCAGGTGGC CGAGGAGCTG CGCCCTCACG CGGAGAACCG TCGCAACGGG
GATCTCCTCC AGCACAAGAC GCTGCTGACC GCGTTCTACC AGCCCAGCAC CCGCACCCGG
CTCTCGACGG AGGCCGCGAT GCACCGCCTC GGCGGTCACG TCCTCGGCTT CTCCGACGCC
AAGATGACCC GCGCCGGCGA CTTCTACCAG GAGTCGATGA AGGACACCGT GAAGATGCTG
GAGTTCTACG GCGACGTGAT CGCCATGCGC TCCCACGTCC AGGGCGCCCC GCACGAAGCC
GCGCGCTGGG CCTCGGTCCC GGTGATCAAC TGCGGTGACG GCTGGGGCGA GCACCCGACC
CAGGTGCTCA CCGACCTCTA CACGATCTGG CGCGACAAGG GCAGCCTCGA CGGCATCAAG
ATGCTCCTTG TCGGCGACAT GCGGATGCGC ACCATGCACT CGATCCTGCT CGCGTCCTCG
CAGTTCGACA TGGAGACGAT GGTCGTCTCC CCGCCGGAGC TGGCCCTGCT CGAGGACTTC
AAGGGCGAGC TCGCCGAGCG CAGCGTGAAC TACCGCGAGC TCGAGTCGGT CGAGCAGGGC
ATCGCCGACG CCGACGTGAT CTACATGGAG CCGGTGGTCC AGGCCGACTA CACGCAGTCC
CGCGTCGACC CCACCGTCGA GAAGGGCACC ACGCCGCCGG CGTACCAGGT CACCCGGCGG
CTGCTGCACG AGAAGGCCAA GCAGGACTCG ATCGTCCTGC ACTCGCTGCC CCGGATGGAC
GAGCTCACTC CCGACGTGGA CGCCACCCGG CACGCCCGCT ACTGGGCCGA GGCCGCCAAC
GGCGTCTCGG TCCGGATGGC GCTGCTGGCG CTGGTCCTCG GCGCGGTCGA GTAG
|
|---|
| Protein sequence | MRSFLGRDIL SLKDVERDDY FRIFQVAEEL RPHAENRRNG DLLQHKTLLT AFYQPSTRTR
LSTEAAMHRL GGHVLGFSDA KMTRAGDFYQ ESMKDTVKML EFYGDVIAMR SHVQGAPHEA
ARWASVPVIN CGDGWGEHPT QVLTDLYTIW RDKGSLDGIK MLLVGDMRMR TMHSILLASS
QFDMETMVVS PPELALLEDF KGELAERSVN YRELESVEQG IADADVIYME PVVQADYTQS
RVDPTVEKGT TPPAYQVTRR LLHEKAKQDS IVLHSLPRMD ELTPDVDATR HARYWAEAAN
GVSVRMALLA LVLGAVE
|
|---|
| |