Gene Noca_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1625 
Symbol 
ID4600004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1724137 
End bp1724583 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content72% 
IMG OID639776224 
ProductAsnC family transcriptional regulator 
Protein accessionYP_922825 
Protein GI119715860 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCACG TCGACTGGCA GATCCTGCAC GAGCTGCAGG CCGATGCCCG GCTCTCGTTC 
AACGAGCTGT CGCGCCGCAT CCACCTGTCG GCGCCGATGG TGGCCGAGCG CGTGCGCCGC
CTCGAGTCCG GCGGGACGAT CACCGGCTAC CACGCGCACG TCGATCCGGG TCGCCTCGGC
CGGTCGGTGC AGGCGCTGGT CGTGATGAAC TGCTACGGGC CGACCTGCCT GCTGCGGGAT
CCGGAGGTGC CGACCTGGCC GGAGGTGCTG CAGCTCCTGC GGATCACCGG CGACGGCTGC
TCGGTCATGC TGGCGGCCGT CGCGTCGATG GCGGACTTCG AGGCGTTCAT CGACCGGCTC
GCGGCCTACG GCCGGCCCAG CAGCAGCATG ATCCTGTCGG CGCCGCTCCC GTGGGCCGCC
GTGAGCGAGC CGCCCGCCCG AGGCTGA
 
Protein sequence
MDHVDWQILH ELQADARLSF NELSRRIHLS APMVAERVRR LESGGTITGY HAHVDPGRLG 
RSVQALVVMN CYGPTCLLRD PEVPTWPEVL QLLRITGDGC SVMLAAVASM ADFEAFIDRL
AAYGRPSSSM ILSAPLPWAA VSEPPARG