Gene Noca_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1571 
Symbol 
ID4595511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1664786 
End bp1666294 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content73% 
IMG OID639776170 
Producthypothetical protein 
Protein accessionYP_922772 
Protein GI119715807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.321873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCT ACGGAGCTTC CACGAGCCGC GACAGGCAGG GCTGGTTCTT CGGCCTCACT 
GGCCCACAGG TCTTCCTCGT GCTCGCGGCC GCGTTCCCGT GCTGGCTGGC CATGTCGGTC
GGCCAGTGGC GGGCGCTGCT CGGGCTCGTG CCACTGTGGC TCGTCGCCGT CGCGCTGGTC
TGCGTCCCCG TGCGCGGCTG GTCGGCCGCT CAGTGGATCG GGGTCCTGGT CCGTCACGTG
ATCGGCCGCG CCACCGGATG GACGCGCTTC CAGTCGAAGG CGGCTGCCGG GGAGTTCGAA
GACGTGACCG AGGCGGACCT GCCCGGCGTA CTCGCTGGCA TCCAGATCCA CGACGGACCC
CCGATGGCGG GGCGCGCCGT ACGCCCCGCG CTCATCCAGA ACCACGCCAC CCGCACTTGG
GCCGCGACCG CAAGGGTCGT CCATCCCGGC ATCGGCATGG CCGACGACGC GGACCGCGGG
CGGATGGGCG CAGGGCTGTC CGAGCTCTTC GAGGCTGCGT CCGCGAGCAG CCTGATCGAC
GTAGTCGCCA TCTGCGTGCG CACGGTTCCC GACGACGGCA CGGAGCGAGC CGAGTGGGTA
CGCCAGCACG CCCGCGCTAC AGAGCCCGAG ATCTCGGCGC GCATCCACGC CCAGCTCGAC
GCCTCGATCA ACGGCGCCGC CGTCCGCACG GAGGCGTTCG TCACCGTCGT CGTCCGCGAG
GACGCGGTCG CCAAGGACGC CCGACGCGCA GGCCGGGGCG TGACCGGACG GGCCCGGATC
CTGTACGGCG TCCTCGGGGA GGTCGAGGCC CGACTCATGG GGGCCATCGG CTGCACACAG
GTCACATGGC TCGATAGCGC CGACCTGGCC ATCGCGATCA GGACCGGGTT CGAGCCTGGA
GACGCTCCCG CGCTCGCCGA CTCGGTGATC CATCACGGCT ACGACGGCGA CATCGCCGCC
GGGGTGCCGG TCGCCGCCGC TGGCCCGACC ACGGCGACGA CTGCGATGCG CTGCTACCGG
CACGGCGAGT GGGAGTCGAT CGCCACCACC ATCCTGCTGC CCCGCAAGGG CGCGGTGATG
GGAGCGCTCG CCCGGGCGCT CGTGCCGTCC CAGGTGGGCG AGCGCCGCGC GCTGACGGTG
TTCTTTCACC CCATCGGTCA GGCCGTCGCC GACCGCACGA CCGGCCGGGC GGAGATGTCG
GCCACGATGG CGGCCGAGGT ACGACGCAGG GTCGGGCGCG TCGAACGCGC CCGGGAGCGA
CGAGCCGTCG AGCAGGTACA CGAGACCGAC GAGAAGCTGG AGCGCGGTCG ATCCCTCGTA
CGGCTCTCCT CGGCACTCGC CGTCACCGTG CCGGCGGCCT GGAACGCCCA GGACTACGGC
CGCCGCCTCG ACGCGTCCGT CCGCCTGTGC GGATTCACGC CGCTGCCCCT CGACGGTGCC
CACGACGCTG CGTTCGCGGC CGCCGTGATC CCGCTGGGCA CCGGACTGCC GAAGCGGCGC
CGGAGCTGA
 
Protein sequence
MTVYGASTSR DRQGWFFGLT GPQVFLVLAA AFPCWLAMSV GQWRALLGLV PLWLVAVALV 
CVPVRGWSAA QWIGVLVRHV IGRATGWTRF QSKAAAGEFE DVTEADLPGV LAGIQIHDGP
PMAGRAVRPA LIQNHATRTW AATARVVHPG IGMADDADRG RMGAGLSELF EAASASSLID
VVAICVRTVP DDGTERAEWV RQHARATEPE ISARIHAQLD ASINGAAVRT EAFVTVVVRE
DAVAKDARRA GRGVTGRARI LYGVLGEVEA RLMGAIGCTQ VTWLDSADLA IAIRTGFEPG
DAPALADSVI HHGYDGDIAA GVPVAAAGPT TATTAMRCYR HGEWESIATT ILLPRKGAVM
GALARALVPS QVGERRALTV FFHPIGQAVA DRTTGRAEMS ATMAAEVRRR VGRVERARER
RAVEQVHETD EKLERGRSLV RLSSALAVTV PAAWNAQDYG RRLDASVRLC GFTPLPLDGA
HDAAFAAAVI PLGTGLPKRR RS