| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1516 |
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| Symbol | |
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| ID | 4595667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1610054 |
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| End bp | 1612120 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639776114 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_922717 |
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| Protein GI | 119715752 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.200062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACGC CCGCCGACCT GCTGACCGCG CTCGATCCCG AGCAGCGCCA GGTCGCGGAG
GCACTGCGCG GGCCGGTCCG GGTGCTCGCC GGCGCGGGCA CCGGCAAGAC CCGCGCGATC
ACGCACCGGA TCGCGTACGG CGTGGCCTCC GGGGTCTACG CGCCCACCGA GGTGCTCGCG
GTCACGTTCA CCACGCGAGC GGCCGGCGAG ATGCGCAGTC GGCTGCGCGC CCTGGGCGCC
GGCCCGGTCC AGGCCCGCAC CTTCCACTCG GCCGCGCTGC GCCAGCTGCG CTACTTCTGG
CCGACCTCCT ATGGCACCGA GCTGCCCACG CTCATCGAGT CCAAGATCGG CCTGCTGGCC
ACGGCCGCCC GGCGCCAGCG GCTCAACGCC GACCAGGCGC TGCTGCGTGA CCTGGCCTCG
GAGGTCGAGT GGGCCAAGGT CAGCAACGTC CACCCGGACG AGTACCCCAT CGTCGCCGCC
CAGCGGGGCC GCAGCGTCTC GGGCCACGAC CCCGACACCG TCGCCCGGGT CTTCGGGAGC
TACGAGGAGG TCAAGCGCGG CCAGGGCCGG ATGGACATGG AGGACGTCCT GCTGCTGACC
GCCGGGCTGC TCGCCGAGGA CGAGCGGGTC GCGGCCCAGG TGCGCCGCCA GTACAAGTGG
TTCGTCGTCG ACGAGTTCCA GGACGTCTCG CCGATCCAGT CCGCGCTCCT CGACCTGTGG
CTCGGCGGCC GCGACGAGCT GTGCGTGGTC GGCGACCCGG CGCAGACCAT CTACTCCTTC
GCCGGGGCGA ACGCCGCCTA CCTGCGCGAC TTCCCGACCC GCCACCCCGG CACGACCTCC
ATCGAGCTGG TCCGCAACTA CCGCTCCACC CCCGAGGTCG TCGGGGCCGC CAACGCGCTG
CTCGGCGGGT CCGCGAGCGC CGGCGTCCAG CTCCGGGCAC AGCGGCCCTC GGGGCCGCCG
GTCACCTACA CGCCGCGGCC CGACGAGGTC GCCGAGGCCG AGTCGGTCGC CGCGCAGGTG
CTCCGGCTGC GCGATGCCGG CCGCTCGCTC GGTGAGGTGG CCGTGCTGTT CCGCATCAAC
GCCCAGTCCG AGGCGTTCGA GGAGGCCCTG GCCGCGCGCG GCCTCCCGTA CGTCGTGCGC
GGCGCCGCTC GGTTCTTCGA CCGGCCGGAG GTCCGCGAGG CGGTCACCCG GCTGCGTGGC
GCGGCCCGAT CCGGCGAGGC CGCCCGAGCC GCCGAGAGCG GCGACGGCGA CTGGGTCGAC
GTGGTGCGGG CGATCCTGGC CGGCATGGGC TGGAGCCCGG AGGCACCCAC GACCCGCGGC
CAGACCCGCG ACCGGTGGGA GTCCTGGCAG GCACTGGTGG ACCAGGCCGC CCAGTTCGCC
GCCGAGTCGG CACGCGACGG CGAGGCCGCC GACCTCGACG CGTTCGTCGA CCACCTCGAC
CGGCGCGCCG CCGAGCAGCA CGCCCCGGTC GCCGACGGGG TCACCCTCGC GACCTTCCAC
GCCGCCAAGG GCCTGGAGTG GGACTCGGTG TTCCTCTGTG GCCTCCAGGA CGGCACCCTG
CCCATAACCT ACGCCGACAC CCCGGCCGCG GTCGAGGAGG AGCGCCGGCT CCTCTACGTC
GGCATCACCC GGGCCCGCGT CGACCTCACG CTGTCCTGGG CGCTCTCGCG CAACCCCGGC
GGCCGCGCCT CCCGCAAGCC CTCGCGCTTC CTCGAGCCGC TGCTGCCTGA CGACGCGCGC
GCCACGCGCG AGCGGCCGCG CGGCCGCAAG GTCGCCAACT GTCGCGAGTG CGGGCGTCCG
CTCGCCACCG GCCAGGAGCT CAAGCGCGGC CGCTGCGCGG ACTGCCCGGC GTCGTACGAC
GAGGAGCTCT TCGAGCGACT GCGCGAGTGG CGCCGCGAGC GCGCCGGGGA GGAGAGCGTC
CCCGCGTTCG TGGTCTTCAC CGACGCCACC CTCCAGCTGA TCGCCGAGCA CAAGCCGCGC
ACACCGGAAG CGCTGCTGCG GATCAACGGG ATCGGCCGGT CCAAGCTCGA GCGGTACGGC
GACGAGGTGC TCACGGTCGT CGGCTGA
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| Protein sequence | MATPADLLTA LDPEQRQVAE ALRGPVRVLA GAGTGKTRAI THRIAYGVAS GVYAPTEVLA
VTFTTRAAGE MRSRLRALGA GPVQARTFHS AALRQLRYFW PTSYGTELPT LIESKIGLLA
TAARRQRLNA DQALLRDLAS EVEWAKVSNV HPDEYPIVAA QRGRSVSGHD PDTVARVFGS
YEEVKRGQGR MDMEDVLLLT AGLLAEDERV AAQVRRQYKW FVVDEFQDVS PIQSALLDLW
LGGRDELCVV GDPAQTIYSF AGANAAYLRD FPTRHPGTTS IELVRNYRST PEVVGAANAL
LGGSASAGVQ LRAQRPSGPP VTYTPRPDEV AEAESVAAQV LRLRDAGRSL GEVAVLFRIN
AQSEAFEEAL AARGLPYVVR GAARFFDRPE VREAVTRLRG AARSGEAARA AESGDGDWVD
VVRAILAGMG WSPEAPTTRG QTRDRWESWQ ALVDQAAQFA AESARDGEAA DLDAFVDHLD
RRAAEQHAPV ADGVTLATFH AAKGLEWDSV FLCGLQDGTL PITYADTPAA VEEERRLLYV
GITRARVDLT LSWALSRNPG GRASRKPSRF LEPLLPDDAR ATRERPRGRK VANCRECGRP
LATGQELKRG RCADCPASYD EELFERLREW RRERAGEESV PAFVVFTDAT LQLIAEHKPR
TPEALLRING IGRSKLERYG DEVLTVVG
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