| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1429 |
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| Symbol | |
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| ID | 4597336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1512660 |
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| End bp | 1514081 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639776027 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_922630 |
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| Protein GI | 119715665 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase
[TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGTT CCGGTGGGCA CGAGCGCGCG CACACGGTCG TGGTGGGCGG CGGGATCAGC
GGACTGACGA CGGCGTACTT CCTGCGGCAG CGTCTCGGTC CGGACGCCGT GCTGCGGGTC
GTCGAGGCCT CGGACGCCCC CGGCGGCAAG ATCCGCACCG CGTCGATCGC CGGGCACCCG
GTCGACACCG GCCCGGACGC CTTCCTCTCC CGGGCGCCCG AGCTGCGGCG CGTGGTCGAC
GCGCTCGGGC TGGCCGACCT GGTCGTCGAG CCGCAGAGCA CGGGCACGTT CATCTGGTCC
CGCGGCCGGC TCCGACGGCT GCCCCCCGGC ACCGCGTTCG GCCTGCCGGA GCGGCTGTGG
CCGCTGTTGC GGTCCGGGCT GCTCGGCCCC GCGGCGGTGG CGCGCGCCGG TCTCGACCTG
GTGCTCCCGC GGACCGCGCT GCCGGACGAC CCCTCGGTCG CGGACGTGGT CCGGCCCCGG
TTCGGCGCCG GCGTCTACGA CCGGCTCGTC GTGCCGCTGC TCGGCGGCGT GCACGCCGGC
GATCCGGCAC TCCTCAGTGC GACCAGCACC GTGCCCGAGA TCGCCGCGAT GGCCCGCTCG
GGCCGCAGCC TCTACCGCAC CCTGCGCCGC CGGCGCCGGT CCGCGCCCCC GGCCACCGGC
CGGCCGAGTG CCCCGCTGGT GTCCCTGCGC GGCGGCCTCG CGGCGCTCAC CGACCGCCTG
GTGGAGGAGC TCGGTCCCGA CACCGTGCTG ACCGGGACGC CGGCCCGCGC CATCGAGCGC
GACGAGAACG GGGGCTACAC GGTGCGCACC GACCGCGGCG CCTTCGCGGC CCGGCAGGTC
GTCCTCGCGA CCCCGGCGTA CGTCGCCGCG GAGCTGGTCG CCGACCTCGC GCCCGATGCG
GCCGCGCTGC TCCGGGAGAT CGGGTACGTC GACGTCGCGA ACGTGACCCT GGCGTTCCGG
CGCGACCAGG TGCCGGCGCT GCCCGCAGGC ACCGGGTTCC TGGTGCCGCC GGTCGAGGAC
GAGCTGGTCG TCGGCTGCAG CTGGCTGTCC CAGAAGTGGC CGCAGCCGGC CGACGCCGGC
GACTACGTCC TGCTCAAGGT CATGGTCGGC CGATCGGGCG ACACCCGGTG GCTCGCCATG
GACGACGCCG AGCTGGTGCG CCACGTGCGC GAGGCCCTGC GCCGGATGCT CGGCGTCACC
GCGGACCCGG TGGAGAGCCT GGTGCAGCGA TGGCCCCGCG CGATGCCGCA GTACGTCGTC
GGGCACGCCG CCCGGCTCGC GGCCCTCGAC ACCGCACTGG CCGCGGCGCC GGGCCTGCTG
GTGACCGGTG CGGCCTACCG CGGCGTCGGC CTGGCCGGCT GCGTCGCCCA GGCCGACGCG
ACCGCCACGT CCCTGCTCGC AACGCAAGGA GCGCCCACAT GA
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| Protein sequence | MTGSGGHERA HTVVVGGGIS GLTTAYFLRQ RLGPDAVLRV VEASDAPGGK IRTASIAGHP
VDTGPDAFLS RAPELRRVVD ALGLADLVVE PQSTGTFIWS RGRLRRLPPG TAFGLPERLW
PLLRSGLLGP AAVARAGLDL VLPRTALPDD PSVADVVRPR FGAGVYDRLV VPLLGGVHAG
DPALLSATST VPEIAAMARS GRSLYRTLRR RRRSAPPATG RPSAPLVSLR GGLAALTDRL
VEELGPDTVL TGTPARAIER DENGGYTVRT DRGAFAARQV VLATPAYVAA ELVADLAPDA
AALLREIGYV DVANVTLAFR RDQVPALPAG TGFLVPPVED ELVVGCSWLS QKWPQPADAG
DYVLLKVMVG RSGDTRWLAM DDAELVRHVR EALRRMLGVT ADPVESLVQR WPRAMPQYVV
GHAARLAALD TALAAAPGLL VTGAAYRGVG LAGCVAQADA TATSLLATQG APT
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