Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1395 |
Symbol | |
ID | 4595868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 1472602 |
End bp | 1473816 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639775993 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_922596 |
Protein GI | 119715631 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.330473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATC GCCCCCGGGG GGACGGCGAG CCCGGGGACG GGTCTCCCGA CTTCCACTGG CTGTACGGCG GCTCCGAGGA CCCGGGCCGC GAGCCGCGAC CCGACGAGAC CCGGGTGCTG CCCACGGTCC CGCGACCCGG CGAGACCCGG CCGCCCGCAC CGGGCCGGCC GGCGACGCAG CCCGGCCGCC CCACGCCGCC CACCGGCCCG CCCACCGGTC CGCCTCCCGG CGGCCGACCC CGCGGCCGGC GCCGGGGGCC GGGGTTCTGG CTGCGGATCG TCGTGGCCCT GCTCGTGCTG TGGGTGGTCT ACCTGGTCGC CGTGCCGCTC TGGGCCTGGA GCAAGGTCGA CAAGGTCGAC TTCGAGCCCT CCGGGGACCG ACCCGGCGAC CAGCCCGGCA CGACGTACCT GCTGGTCGGC AGCGACTCGC GGGCCGGCCT GAGTCCCGAG GAGCGCAAGC AGCTCGGCAC CGGCAACGCG GCGGGACAGC GCACCGACAC GATCATGTTG CTGCACACCG GCGACGGCCC CAACCTGCTG ATGTCCATCC CTCGCGACTC GCTCGTGGAG ATCCCGGGGC ACGGCACCAC GAAGATCAAC GCGGCCTACG CGTACGGCGG TCCCAAGCTG CTGGTGAAGA CCATCGAGCA GAACACCGGG ATCCGGGTCG ACGACTACGT GGAGATCGGG CTCGGCGGGC TCGCAGGCGT CGTGGACGCC GTCGGCGGCA TCACGATCTG CCCGAAGCAG GACATGGTGG ACAAGCTGGC GAACCTGGAC GTGAAGAAGG GCTGCCAGGA GGCCGACGGC ACCACGGCCC TCGGCTACGC CCGGTCCCGG CACACCTCCA ACATCGGCGA CATCGACCGG GTCAAGCGGC AGCGCGAGGT CGTCGCGGCG GTCGGCGACG AGGTGGTGTC GCCGTGGACG GTGCTCAACC CGGTCCGCTA CTGGCGGCTG TCCAACGCCG TCCCCGACTT CTTCGCCTTC GGCGAGGGCA CCAGCCCCGT GCGGGCAGCC ATGTGGGCCT CGTCGATGAC GCACGTCAAC GGCGAGAACG GGCTCAGCTG CGTGGTGCCG ATCGCCGACC TCGCGGTGCA CTGGGACGCC GAGCGCTCCC AGCAGATGTT CCGCTACATC ATCGAGGACA GGACCGACGC CATCCCGGCG AGCCTGTGCA CGCCCACCGG ACTCCCGAAG AGCGTGACCG GATGA
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Protein sequence | MTDRPRGDGE PGDGSPDFHW LYGGSEDPGR EPRPDETRVL PTVPRPGETR PPAPGRPATQ PGRPTPPTGP PTGPPPGGRP RGRRRGPGFW LRIVVALLVL WVVYLVAVPL WAWSKVDKVD FEPSGDRPGD QPGTTYLLVG SDSRAGLSPE ERKQLGTGNA AGQRTDTIML LHTGDGPNLL MSIPRDSLVE IPGHGTTKIN AAYAYGGPKL LVKTIEQNTG IRVDDYVEIG LGGLAGVVDA VGGITICPKQ DMVDKLANLD VKKGCQEADG TTALGYARSR HTSNIGDIDR VKRQREVVAA VGDEVVSPWT VLNPVRYWRL SNAVPDFFAF GEGTSPVRAA MWASSMTHVN GENGLSCVVP IADLAVHWDA ERSQQMFRYI IEDRTDAIPA SLCTPTGLPK SVTG
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