| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1393 |
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| Symbol | |
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| ID | 4595866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1470960 |
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| End bp | 1471742 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639775991 |
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| Product | sigma-70 region 4 domain-containing protein |
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| Protein accession | YP_922594 |
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| Protein GI | 119715629 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0296356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCACC GACGAGAGGC CACCGCCCGG CTCTTCGACG AGTTGGAGAA CGCGTCCGAC
GACGAGCGCC GCCGTATTCG CGACGAGATC GTCCGGCTCA ACATGGGCGT CGCCAGCGAC
TGCGCCCGTC GCTACCGGCA GCGCGGCATC GCCACCGAGG ACCTGGACCA GGTGGCCTAC
CTGGGGTTGG TCAAGGCGGT CCGCGGCTTC GAGCCGGGCC GCGGCCACGA CTTCTTGTCC
TTCGCGGTGC CGACGATCCG TGGCGAGGTG CGCCGGCACT TCCGCGATCT CGGCTGGGCG
CTGCGGCCGC CCCGATCGAT CCAGGAGCTC CAGTCGCGCA TTCACGCTGC CGAGGGCGAC
CTGTCCCAGG AGCTGGGTCG CTCGCCGCGG CCGAGCGACC TCGCCCGCCA CCTCGGGGTC
GACCTGGAGC AGGTGCTCGA CGCGCTGGGC GCGACCGGCT GCTTCGCCCC GGCCTCACTC
GACGTGGTCG GCGCCGACGG TGACGACTCC CTGGGCGACC GGCTCGGCAC GGCGGATCCG
GCGTTCGACC AGGCCGAGGC ACGGATCACG CTGGCGGCGG TGCTGCGCGG ACTGACGCCG
AGGGAGCGTC GGATCCTCGA GCTGCGGTTC TTCGGCAACC ACACCCAGGC CGAGATCGGC
GCCGACATCG GCGTCACCCA GATGCAGGTC TCCCGGCTGC TGAACCGGAT CCTGGCCCGC
CTGCGGGAGC GGATGCTCGC CGCCTCCGAC GAGGCGCCGG TGTCCTCGGG CCCGGCGGCT
TAG
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| Protein sequence | MEHRREATAR LFDELENASD DERRRIRDEI VRLNMGVASD CARRYRQRGI ATEDLDQVAY
LGLVKAVRGF EPGRGHDFLS FAVPTIRGEV RRHFRDLGWA LRPPRSIQEL QSRIHAAEGD
LSQELGRSPR PSDLARHLGV DLEQVLDALG ATGCFAPASL DVVGADGDDS LGDRLGTADP
AFDQAEARIT LAAVLRGLTP RERRILELRF FGNHTQAEIG ADIGVTQMQV SRLLNRILAR
LRERMLAASD EAPVSSGPAA
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