Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1390 |
Symbol | |
ID | 4595863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1466184 |
End bp | 1467356 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639775988 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_922591 |
Protein GI | 119715626 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCCG AGTTCCCTCT CTTCGCCCTC TCCGAGGAGC ACCAGGCCGT CCGCGAGGCG GCCCGAGCCG TGTGCGACGC GAAGGTCGCA CCGTTCGCCG CCGACGTCGA CGAGCACGCC CGCTACCCGC GGGAGGCGGC CGAGGCCCTG CTGGCTGCGG ACTTCCACGC CCCGCACATC CCGGAGCAGT ACGGCGGTGC CGGCGCCGAC GCGCTCGCCA CCGTGATCAT CATCGAGGAG GTCGCCCGGG CCTGTGCCTC GAGCAGCCTG ATCCCGGCGG TGAACAAGCT GGGGTCGCTG CCGATCCAGC TGGCCGGCTC GGAGGAGCTG AAGGCGAAGT ACCTGGGTGC GCTGGCGCGC GGTGAGGGCG GGTTCTCCTA CTGCCTCTCC GAGCCGGACG CGGGCTCGGA CGCGGTGGGG ATGAAGGCCC GAGCCGTGCG CGACGGGGAC ACCTGGGTGC TCAACGGCGT GAAGCGCTGG ATCACCAACG CGGGCGAGTC GGAGTACTAC ACGGTGATGG CGGTGACGGA CCCCGAGAAG CGCTCCCGGG GGATCAGCGC GTTCGTGGTG GAGAAGAGCG ACGAGGGCGT CTCCTTCGGT GCCCCGGAGA AGAAGCTCGG CATCAAGGGC TCTCCGACCC GGGAGGTCTA CCTGGACAAC GTCCGCATCG GTGCGGACCG GATGATCGGG GCGGAGGGCG GCGGGTTCGA GATCGCGATG CGCACCCTGG ACCACACCCG GGTCACGATC GCGGCGCAGG CCGTCGGCAT CGCCCAGGGG GCGTTGGACT ACGCGCTGGG CTACGCCCAG GAGCGCAAGC AGTTCGGGAA GCCGATCAGC GACTTCCAGG GCCTGCAGTT CCTGCTGGCC GACATGGGGA TGAAGGTCGA GGCCGCGCGC CAGCTGACCT ACGCGGCGGC CGGGAAGTCC GAGCGGGGCG ACAGCGACCT GACGTTCTTC GGGGCTGCGG CGAAGTGCTT CGCCTCCGAC GTCGCCATGG AGGTCACCAC CAACGCCGTC CAGGTCCTCG GCGGGTACGG CTACACCCGG GACTACCCGG TCGAGCGGAT GATGCGGGAC GCGAAGATCA CCCAGATCTA CGAGGGCACC AACCAGGTGC AGCGGATCGT GATGGCCCGC CAGCTCCTCG CCGGCGTCCA GTCCCAGCTC TGA
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Protein sequence | MSSEFPLFAL SEEHQAVREA ARAVCDAKVA PFAADVDEHA RYPREAAEAL LAADFHAPHI PEQYGGAGAD ALATVIIIEE VARACASSSL IPAVNKLGSL PIQLAGSEEL KAKYLGALAR GEGGFSYCLS EPDAGSDAVG MKARAVRDGD TWVLNGVKRW ITNAGESEYY TVMAVTDPEK RSRGISAFVV EKSDEGVSFG APEKKLGIKG SPTREVYLDN VRIGADRMIG AEGGGFEIAM RTLDHTRVTI AAQAVGIAQG ALDYALGYAQ ERKQFGKPIS DFQGLQFLLA DMGMKVEAAR QLTYAAAGKS ERGDSDLTFF GAAAKCFASD VAMEVTTNAV QVLGGYGYTR DYPVERMMRD AKITQIYEGT NQVQRIVMAR QLLAGVQSQL
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