| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1304 |
|---|
| Symbol | |
|---|
| ID | 4598926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1378428 |
|---|
| End bp | 1379324 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639775898 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_922505 |
|---|
| Protein GI | 119715540 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.857292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACCGAG GCTGGCGATC GTGGGGCCCC CCGGTCCTGC TGATCCTCCC GTCCCTGATC
CTGATCGGGG TCTTCGTCTA CGGCCTGATC GGCGTCAACT TCAACACCTC GTTGACCGAC
CAGCACCACC GCATCGGCGG TGACGTCGCG TACGTCGGGT TCGACAACTA CAAGACGCTG
TTCCAGGACG ACACGTTCGT CTACTCGCTC AAGAACCTGC TCAAGTACAC CGGTGCCTTC
CTCGTCGGCA CCCTGGTGAT GGGCTTCATC TGGGCCTGGC TCCTGGAGAA GGGCGTGAAG
GGCGAGGGGT TCTTCCGCGC CGTCTACCTC TTCCCGATGG CGGTCTCGTT CATCGCCTCC
GGTGTGGTGT GGCGCTGGCT GCTCAACAAC GCCGAGGGCG ACCGGGCCGG CGGCCTCAAC
CGGCTCTTCG ACCAGGTCGG GCTCGGGTTC CTCCAGAACC AGTGGTGGAC CGACCCCCAA
TGGGGTGTCG TCGCCATCGC GCTCCCCGCG ATCTGGCAGC TGTCGGGCTA CGTGATGGCG
CTCTTCCTCG CGGGCTTCCG CGGGATCCCC GACGAGCTGC GCGAGGCGGC CCGGGTCGAC
GGCGCCTCGG AGTGGCAGCT CTACCGCCAC GTGATCTTCC CCCAGCTCAG CCCGGTCGCG
CTCTCGGCCA TCGTGATCGT CGGCCACATG TCGCTGAAGG TCTTCGACCT GATCATGGCG
ATCGCGGGCC AGACGAACTA CACGACCCAG GTGCCGGCCA TCCAGATGTG GGTCGAGTTC
ACCCGCGGTG ACTACGCCCG CTCCGCGGCG ATCGGCACGA TCCTGCTCGT GATCGTGGCG
TTCCTGATCA TCCCCTACCT CGTCTACACC TACCGGCAGG AGCGGCTGAC CCGATGA
|
|---|
| Protein sequence | MNRGWRSWGP PVLLILPSLI LIGVFVYGLI GVNFNTSLTD QHHRIGGDVA YVGFDNYKTL
FQDDTFVYSL KNLLKYTGAF LVGTLVMGFI WAWLLEKGVK GEGFFRAVYL FPMAVSFIAS
GVVWRWLLNN AEGDRAGGLN RLFDQVGLGF LQNQWWTDPQ WGVVAIALPA IWQLSGYVMA
LFLAGFRGIP DELREAARVD GASEWQLYRH VIFPQLSPVA LSAIVIVGHM SLKVFDLIMA
IAGQTNYTTQ VPAIQMWVEF TRGDYARSAA IGTILLVIVA FLIIPYLVYT YRQERLTR
|
|---|
| |