Gene Noca_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1292 
Symbol 
ID4598914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1365690 
End bp1366370 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content75% 
IMG OID639775886 
Productregulatory proteins, IclR 
Protein accessionYP_922493 
Protein GI119715528 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCGGCC CGCAAGACCT CCTGATCCCT ACACTCAGGA GCGTGCCGGC CGAGACCTCC 
CAGACGCTGG ACCGCGGGCT GCGGGTCCTC GACGTGCTCG CCCGCGCGAG CGACGGACTG
ACGGTCACCG AGCTGGCCGC CCGGCTCGAG GTCAACCGGA CCGTCGTCTA CCGCCTGGTG
AGCACGCTCG AGCAGCACGC GCTGGTACGG CGGGATCCGC GCGGGCGGCT GCACCTGGGA
CTACGCGTGC TGCACCTGGC CTCGGCGGTG CAGCCGGTGC TGCGCGACCT CGCCGTACCC
GTGCTGCGTG AGCTGGCCGA GTCGGTCGGC TGCACGGCGC ACCTCACGGT CGCCGACGGC
GAGGAGGCGC TCGCGCTCGC GGTCGTCGAG CCGTCGTGGA CCGACTTCCA CGTGAGCTAC
CGGATCGGCG CGCGGCATCC GCTGAGCCAG GGTGCGGCCG GGAAGGCGAT CCTGCTGGGC
CGGCGCTCCG ACGGCGGGTC CGTCGCGGTG ACGACCGGTG AGCTCCAGCC CGGAGCCCGG
GGGATCGCTG CGCCCGTGCG GGGCGTCGAG GGTCTCGAGG CGAGCGTCGG CATCATCACG
CTGGGCACCG ACCTCGACGT GGACGCCGTC GGCCCGGTCG TCCGCCGGGC CGCCGAGGAG
GTCGCGGCCC GGCTCTCGTG A
 
Protein sequence
MGGPQDLLIP TLRSVPAETS QTLDRGLRVL DVLARASDGL TVTELAARLE VNRTVVYRLV 
STLEQHALVR RDPRGRLHLG LRVLHLASAV QPVLRDLAVP VLRELAESVG CTAHLTVADG
EEALALAVVE PSWTDFHVSY RIGARHPLSQ GAAGKAILLG RRSDGGSVAV TTGELQPGAR
GIAAPVRGVE GLEASVGIIT LGTDLDVDAV GPVVRRAAEE VAARLS