Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1292 |
Symbol | |
ID | 4598914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1365690 |
End bp | 1366370 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639775886 |
Product | regulatory proteins, IclR |
Protein accession | YP_922493 |
Protein GI | 119715528 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCGGCC CGCAAGACCT CCTGATCCCT ACACTCAGGA GCGTGCCGGC CGAGACCTCC CAGACGCTGG ACCGCGGGCT GCGGGTCCTC GACGTGCTCG CCCGCGCGAG CGACGGACTG ACGGTCACCG AGCTGGCCGC CCGGCTCGAG GTCAACCGGA CCGTCGTCTA CCGCCTGGTG AGCACGCTCG AGCAGCACGC GCTGGTACGG CGGGATCCGC GCGGGCGGCT GCACCTGGGA CTACGCGTGC TGCACCTGGC CTCGGCGGTG CAGCCGGTGC TGCGCGACCT CGCCGTACCC GTGCTGCGTG AGCTGGCCGA GTCGGTCGGC TGCACGGCGC ACCTCACGGT CGCCGACGGC GAGGAGGCGC TCGCGCTCGC GGTCGTCGAG CCGTCGTGGA CCGACTTCCA CGTGAGCTAC CGGATCGGCG CGCGGCATCC GCTGAGCCAG GGTGCGGCCG GGAAGGCGAT CCTGCTGGGC CGGCGCTCCG ACGGCGGGTC CGTCGCGGTG ACGACCGGTG AGCTCCAGCC CGGAGCCCGG GGGATCGCTG CGCCCGTGCG GGGCGTCGAG GGTCTCGAGG CGAGCGTCGG CATCATCACG CTGGGCACCG ACCTCGACGT GGACGCCGTC GGCCCGGTCG TCCGCCGGGC CGCCGAGGAG GTCGCGGCCC GGCTCTCGTG A
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Protein sequence | MGGPQDLLIP TLRSVPAETS QTLDRGLRVL DVLARASDGL TVTELAARLE VNRTVVYRLV STLEQHALVR RDPRGRLHLG LRVLHLASAV QPVLRDLAVP VLRELAESVG CTAHLTVADG EEALALAVVE PSWTDFHVSY RIGARHPLSQ GAAGKAILLG RRSDGGSVAV TTGELQPGAR GIAAPVRGVE GLEASVGIIT LGTDLDVDAV GPVVRRAAEE VAARLS
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