| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1230 |
|---|
| Symbol | |
|---|
| ID | 4599279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 1307023 |
|---|
| End bp | 1307910 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639775824 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_922431 |
|---|
| Protein GI | 119715466 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCGT CAGGCGCTCA GAAACGCACG ATCGTTCGTT CTATTATCCG GATTGGCTTC
GGGCTGCTCG ACCGGGTGGC GCCGGGGCTC GGCGCCCGGC TCGTGATCCG GATCTGGTTC
CGGATCCCGC GCGGCATGCC GCTGGTCGCG CCGACCGGCG CCCCGTTCGA GGTGCGCTGG
CAGGGCCGCA CCCTGCGCGG TCAGGTCTGG GGCGAGGGTC CGCCGGTCTA CCTGGTGCAC
GGCTGGGGCG GCAACGGCGA CCAGATGCGG CACTTCGTCG AGCCGCTGGT CGCCGCCGGG
CACCGGGTCG TGGCGTACGA CGGGCCCTCC CACGGCCGCT CGGACGCGGG CCGGCACGGT
CCGGAGACGA CCGACGCGGT CGAGCTCGCC CAGGCCCTGG ACGCCGTGGT CGCGGAGTTC
GGCCCGGCGC GGGCGGTCGT GGCCCACTCG CTCGGCACGC TCTCCCTGCT CCTCGCCCTG
CGGGACGGCT GGTTCACCGC CGAACGGGTG GTGCTCGTCG CGCCCGTGGA CGGCGTCCCG
GGGTTCACGG CGTACTTCCG CCGGCTCCTC GGCTTCGGCG ACCGGGTCCA GCGGCACACC
GAGCGGCTGG TCGAGGAGCG GACGGGCTAC CGCCCCGACG AGCTCCAGAC GCTGCTGCTC
GCCGAGCGTC CGGGCCTGCC CGAGGCGCTG GTCGTGCAGG ACCGCGACGA CCGCAGCGTC
GGCACCGGTC TCGCCCGCGA GCTCGCCGCC GGCTGGCCGG GCGCGACGTA CCTGGAGACC
CGCGGCCTGG GCCACAGCCG GGTGCTGGCC GATCCTGACG TCGTCGCGAG CGTGGTGCGG
TTCGTGGCCG ACGAGGTGGC CGATGCCCGT GACGAGCTCG CCTCCTGA
|
|---|
| Protein sequence | MASSGAQKRT IVRSIIRIGF GLLDRVAPGL GARLVIRIWF RIPRGMPLVA PTGAPFEVRW
QGRTLRGQVW GEGPPVYLVH GWGGNGDQMR HFVEPLVAAG HRVVAYDGPS HGRSDAGRHG
PETTDAVELA QALDAVVAEF GPARAVVAHS LGTLSLLLAL RDGWFTAERV VLVAPVDGVP
GFTAYFRRLL GFGDRVQRHT ERLVEERTGY RPDELQTLLL AERPGLPEAL VVQDRDDRSV
GTGLARELAA GWPGATYLET RGLGHSRVLA DPDVVASVVR FVADEVADAR DELAS
|
|---|
| |