| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1001 |
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| Symbol | |
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| ID | 4599777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1051979 |
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| End bp | 1053361 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639775602 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_922209 |
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| Protein GI | 119715244 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.294858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCC CGGTCCTGAC GTTCCTGGGT GCGGCCGAGT CGGTGACCGG CAGCAAGTTC
CTCGTGGACA CCCACAGCTC GCGCACGTTG GTCGACGCGG GGCTCTACCA GGGCCTGGCC
GACCTGCGCC GCCGCAACTG GACGCCGTTC CCGGTCCCGG CGTCCGGGCT CGGGTCGGTC
GTGGTGACGC ACGCGCACCT CGACCACTGC GGCTTCCTCC CGCGCCTGGT GAAGGAGGGC
TTCGACGGCC CGATCCTCTG CTCACCCGAC ACCGCGGAGC TCGTGGAGAT CGTGCTGCGC
GACAGCGCCC ACCTGCAGGA GGAGGACGCG CGCCAGGCCA ACGCGGGCGG CTACTCCAAG
CACCGTCCCG CGCTGCCGCT CTACGACCTC GAGGACGTCG AGCGCACGCT GCCGCTCCTG
ACGCCGACGG ACTTCGGGAC CGCCGTCGAC CTGGCCCCCG ACGTCCGGGC GGAGCTGCGC
CCCGCCGGCC ACATCCTGGG GTCGTCCACC GTGCTCCTCG ACGCCGCCGG CCGGCGCACC
CTGTTCAGCG GCGACCTCGG CCGCGACCAC CACCCGATCC TGCGTGCGCC CGCCGACCCA
CCCGCGGCAC ACGTGGTCGT CGTGGAGTCG ACGTACGGCG ACCGGCGCCA CCCCGCCACC
GACGCCGAGG TGCTCGCATC GGCCGTGCGC CGCACCATCG GCCGCGGTGG GACCGTGCTG
GTGCCGGCGT TCGCAGTCGA CCGCACCGAG CTGGTGCTGC TCGAGCTGCA CCGGCTGATG
GAGGCCGGCG AGGTGCCGCG GGTCCCGGTC CACCTCGACA GCCCGATGGC GTTGCGAGCC
CTGACCGTCT ACCGCGAAGC CCTCGACACC GGGTCCGTGC AGCTGCGCCC CGACCTGGAC
CAGGTCCGCG CCGCCCTCGG CGCGATGCAC GTCGATGCCG TCCCGGACGT GGCCGGGTCG
ATGCGGCTCA ACCGGCCCGG AAAGCCCTGC ATCGTGGTCT CGGCGTCGGG CATGGCCACC
GGCGGCCGCG TCGTGCACCA CCTCGCGCAC CAGCTCCCGG ACCCGCGCAA CACCGTCGTG
CTCACCGGCT ACCAGGCCGT CGGCACCCGC GGGCGCCAGC TCCTGGACGG CGCCCGCCAG
GTGAAGATGC ACGGGCGCTA CGTGCCCGTC CGGGCCGAGA TCGTCGATGT GCCGTACTTC
TCGGTGCACG CCGACGCCGA CGACATCGTC GGCTGGCTGG GCCGCGCCCC CGAGCCGCCC
GAGATCGTGT ACGTCGTGCA CGGCGAGCCG GCCGCCTCGG CGGCGCTGGC CCGGCGGATC
ACCGAGGACC TCGGCTGGCC GGCGGTGGTG CCGCGGCTCG GCGAGCGGGT CCGGCTGGAC
TGA
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| Protein sequence | MSSPVLTFLG AAESVTGSKF LVDTHSSRTL VDAGLYQGLA DLRRRNWTPF PVPASGLGSV
VVTHAHLDHC GFLPRLVKEG FDGPILCSPD TAELVEIVLR DSAHLQEEDA RQANAGGYSK
HRPALPLYDL EDVERTLPLL TPTDFGTAVD LAPDVRAELR PAGHILGSST VLLDAAGRRT
LFSGDLGRDH HPILRAPADP PAAHVVVVES TYGDRRHPAT DAEVLASAVR RTIGRGGTVL
VPAFAVDRTE LVLLELHRLM EAGEVPRVPV HLDSPMALRA LTVYREALDT GSVQLRPDLD
QVRAALGAMH VDAVPDVAGS MRLNRPGKPC IVVSASGMAT GGRVVHHLAH QLPDPRNTVV
LTGYQAVGTR GRQLLDGARQ VKMHGRYVPV RAEIVDVPYF SVHADADDIV GWLGRAPEPP
EIVYVVHGEP AASAALARRI TEDLGWPAVV PRLGERVRLD
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