Gene Noca_0992 details

Gene Information

• Locus tag: Noca_0992
• ID: 4599768
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1041802
• End bp: 1042458
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639775593
• Product: regulatory protein, LuxR
• Protein accession: YP_922200
• Protein GI: 119715235
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.850793
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGACC ACGGCACGAG CGGGAAGATC ACCGTCTACC TGCTCGACGA CCACGAGTTG 
GTGCGCCGGG GCATCCGGGA GCTGCTGGAG AGCGAGGGCG ACATCGTCGT CATCGGCGAG 
TCCGGCCTGG CTGCCGAGGC CGCGCGGCGC ATCCCCGCCC TCCGCCCCGA CGTCGCCATC 
CTCGACGGTC GGCTGCCCGA TGGCTCCGGC ATCGACGTGT GCCGCGACGT GCGCTCGGTC 
GACCCGGGCA TCGCGGCGCT GATCCTCACG TCGTACGACG ACGACGAGGC GCTGTTCTCC 
GCGATCATGG CCGGTGCCGC CGGCTACATC CTCAAGCAGG TCAAGGGCAC CGACTTCGTC 
GAGACGGTCC GTCGGGTGGC CGCCGGCCAG TCGATGCTGG ACCCGGCGGT GACCGCCCAC 
GTCCTCGACC GGCTGCGCGC CGGGCCGCGG ATGGACCCCT CGATCGAGCA GCTGACCGCC 
CAGGAGCAGC GCATCCTCGA GCTGATCGGC CAGGGCATGA CGAACCGGCA GATCGCCGCC 
CACCTGTGCC TCGCCGAGAA GACCGTCAAG AACTACGTCT CCTCGATGCT CGCCAAGCTC 
GGCCTCGAGA GCCGCACCCA GGCGGCCATC TTCGCCACCA AGCACCTCGG GGTCTGA 

 

Protein sequence

MEDHGTSGKI TVYLLDDHEL VRRGIRELLE SEGDIVVIGE SGLAAEAARR IPALRPDVAI 
LDGRLPDGSG IDVCRDVRSV DPGIAALILT SYDDDEALFS AIMAGAAGYI LKQVKGTDFV 
ETVRRVAAGQ SMLDPAVTAH VLDRLRAGPR MDPSIEQLTA QEQRILELIG QGMTNRQIAA 
HLCLAEKTVK NYVSSMLAKL GLESRTQAAI FATKHLGV