Gene Noca_0960 details

Gene Information

• Locus tag: Noca_0960
• ID: 4597493
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1009890
• End bp: 1010549
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 639775563
• Product: hypothetical protein
• Protein accession: YP_922170
• Protein GI: 119715205
• COG category: [S] Function unknown
• COG ID: [COG1739] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00257] uncharacterized protein, YigZ family

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.239073
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTGACCG GTTACCTGAC GATCGGGCGC GACGCCGAGG CCGAGATCGA GGTCAAGCGC 
TCCCGGTTCC GGTGCACGCT CGAGCGGGTC GAGGACGAGG CCGCCGCCCG GGCCGTCGTC 
GAGCGGCTGC GCCGTGAGCA CTGGGACGCC CGGCACCACT GCTCCGCCTT CCGGATCCGG 
CAGAGCGGCC TCGGCCCGGG CGGGGAGGTC GAGCGCTCGT CCGACGACGG CGAGCCCGCC 
GGCACCGCCG GCGCCCCGAT GCTCGAGGTG CTCCGCGGCC ACGCCGAGGG CGGGGTCAGC 
GACGTGGTCG CGGTGGTCAC CCGCTGGTTC GGCGGCACCC TGCTCGGCGC CGGCGGGCTG 
GTCCGGGCGT ACGGCGACGC CGTGCGGGCC GGCCTGGCCG AGGCGGGGAC CCTGCGGCGC 
AGCCTGGTAC GCGAGCACCT CCTCGACCTC GGCCACGCCG ACGCCGGCCG GGTCGAGAGC 
GAGCTGCGTT CGCGGGGCGT CGTCGTGCTG GACTCGACGT ACGGCGTCCA CGTCACGCTG 
CGTCTCGGCG TGCCGCCGGA CGAGGAGGAG CGGCTGGCCG CCCTCGTCGC CGAGCTCACC 
GCCGGCGCCG CGGAAACACG TGCCGCCGGC GAGCGCTGGG TCGATAGCCT CACCACATGA 

 

Protein sequence

MVTGYLTIGR DAEAEIEVKR SRFRCTLERV EDEAAARAVV ERLRREHWDA RHHCSAFRIR 
QSGLGPGGEV ERSSDDGEPA GTAGAPMLEV LRGHAEGGVS DVVAVVTRWF GGTLLGAGGL 
VRAYGDAVRA GLAEAGTLRR SLVREHLLDL GHADAGRVES ELRSRGVVVL DSTYGVHVTL 
RLGVPPDEEE RLAALVAELT AGAAETRAAG ERWVDSLTT