| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0944 |
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| Symbol | |
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| ID | 4597477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 990990 |
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| End bp | 994235 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639775547 |
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| Product | ABC transporter, transmembrane region, type 1 |
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| Protein accession | YP_922154 |
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| Protein GI | 119715189 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones
[V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit
[TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCCGG GCGACCCCCG GATCCGGCGT CAGCTCGCCC CGGCCCGACC TCAGCTCGCC
GTCGTCCTGG CCGCGGGCGT CGTGGGCAGC GTGCTGCTGG TCGCCCAGGC CTGGGTGGTC
ACCGAGCTCG TGCTCGCCGC GCTCCACGAC GGCGACGTCG GCCGCTGGGC GGTCCTCGTG
GCCGTGGTCT TCGTGGCCCG GTCGCTCACC GGCTGGACCA CCGACACGAT GGCGGCCCGG
GCGGCTGCCG TCGTCGGCAC CGACGTACGA CGGCGGGTCG TCGGCGCGAT CCTGCGCTCC
GACGGCTCCC GGTCCTCCGG TGAGCTGGCC ACCCTCGCGA CCCGGGGCGC GAGTGCCGCG
GAGCCGTACC TCACCCGCTA CGTGCCGGCG CTGGTGCTCG CCGGGGTGCT GCCCTGCGTG
ACGCTGGTCG CGATCGCCAC GCAGGACCCG ATGAGCGCGC TCGTCGTGGT CGGCACGCTG
CCGCTGATCC CGGTCTTCGG GATCCTGGTC GGCTTGGCGA CCGAGGACCG GGCGCGTTCC
CAGTGGCGCG CGCTCGCGTC GCTGTCGGGT CACTTCCTCG ACGTGATGCG CGGGCTGCCG
ACGCTGGTCG CGTTCCGCCG GGCCGGCGCC CAGGCCGCGA CGATCCGCGC GGTCACCGAC
CGCTACCGGC GCCGGACCAT GGACACGCTG CGCATCGCCT TCGTCTCCTC GGCGATCCTC
GAGCTGGTGG CGACCCTGTC GGTCGCGCTG GTCGCGGTCA CCGTGGGGCT GCGGCTCGCG
CAGGGCAGCC TCGACCTGGA GACCTCGCTG GTCGTGCTGC TGCTGGCCCC CGAGGCCTAC
TGGCCGCTGC GGCGGGTCGG GGCCGAGTTC CACGCCGCAG CCGAGGGCGT CGCGACCTTC
GAGGCGGCCA GCGAGCTCGT CGACGAGCCG GGCCCGACCG ACGGCGTACG CCGGGCCGGG
CCGATGTCGC TCGAGGGCGT GACCGTGCTG CGCCCCGGGC GGGCCGTGCC CGCCCTCGAG
GACGTCACCC TGACCGTGCC CGACCGTGGC GTGACCGCCC TGACCGGACC GTCCGGGTGC
GGCAAGTCCA CGCTGCTCGC GGTCCTCGCG GGTCTGCTGG AGCCGACCTC GGGGGTGGTC
CGCGGCCCGG ACCGCCGCCG GATCGCGTGG CTGCCGCAGC GCCCGGTGTT CGTCGCGGGC
ACCGTGGCCG ACAACCTCCG GCTCGCCGTG CCCGACGCCG ATGAGCACCG GCTCTGGGAC
GCGCTGCGCC GGGTCGCCCT GGAGGAGCGG GTCCGCGACC TGCCCGCGGG ACTCGACACC
GTGCTCGGCG AGGACGGGGC CACCCTCTCC GCCGGCGAGC GGGCCCGGCT CGCCCTGGCC
CGCGTGGTGC TGGCCGACCG ACCGTGGGTG CTGCTCGACG AGCCCACCGC CCACCTGGAC
GCCCTGACCG AGCAGGTGGT CGCCGACACC GTCCAGGAGC TCGGCCTGAC CCGCGCGGTG
GTCGTGGTCG CCCACCGCCC GGCCCTGGTC GCACTGGCCG ACCGGGTCGT CGTCCTGACC
CCGCCCGAGG TGCCCGAGGT CGTGCCCACC GTCGAGGCGG CGGCCGCTCG TCCCACCGCC
ACGGAGCCCC CGGCCGAGCC GCGGCGCCGG GGCCTGCTGC TGCCGACCCT CGTCGGCGGG
CTGGCCTCCG CGTCCGGCGT CGCGCTCACC GCGACCGCCG GCTGGCTGAT CGTCCAGGCC
TCGCACCAGC CGCCGGTGCT CACCCTGCTG GTCGCCATCG TCGGCGTGCG GACCTTCGGG
CTGGCGCGCC CGGCGCTGCG GTACGTCGAG CGGCTGCGCT CCCACGACGT CGTGCTCCGG
ATGCTGGCCG AGCGCCGGGT CCGGGTCTAC GAAACCGTCG TACCGCTGAC CCCCGGCGCC
CTGGGCCGGC GCCGGGGCGA CGTGCTGGCC GCGATCGTCG ACGACGTGGA CTCGGTGCTC
GACCGGGAGC TGCGGGTCCG GATGCCGGTG CGCGGTGCGC TCGTCGTCGC GGCGCTCGCG
CTCGCGGTGG CCGCGATCAT CGAGCCGCGC TCCGTGCCGG TCGTCGCGGG CACCTGCCTG
GTCGCGGGCG GCCTGGGCTA CCTGCTCGCC CGGGCCGGTG CGACCCGAGC CGAGCGCCGT
GCGGTCGAGA GCCGGGCCCG CCTCTCCGAG GTCGTCGTCG AGGTCACCCA GACCGCGAGC
GAGCTGACGT TGTGGCAGGC GGAGCGACGC GCGCTCTCGT CGGTGTCCGC GGTCAGCGAC
GAGCTCGGTC GCGCCGCCGT CACCGCCGCG ACCTGGCTGG CCTGGGCCCG CGCCGTCGTG
CTGGCCGTCT CCGGGGCCGG GGTCGCGGTG ATGGCCTGGG TGCTGACGCC ACTCGTGGCC
GACGGCGCGC TGTCCGGTCC GATGCTCGCG CTGCTGGTGC TGCTGCCGCT GGCCCTCGCG
GAGGTCGCCT CCTCGGTCGC CGACGCCGGT GCCCTCTCGG CCCGGACCCA GGCCGCGGAG
GAGCGGCTGG CGCGGATCGC GGCCACCCCG CCGGCGGTGG CCGATCCCGA GGACCCGGTG
CCGGCCGACA GCCGCGACCG GGTGGGCCTC GAACGGGTGT CGGCCGCCTG GGCGGACCGG
GTCGTGCTCG AGGACCTCTC CCTCGACCTG CGCCCCGGTG ACCGGGTCGC GGTGGTCGGC
CCGACCGGCT CGGGGAAGAG CACGCTCGCG TCGCTGCTGC TGCGGTTCGT CGACCCGGTG
CGCGGCCGGA TCGTGCTCGG GCGGCGCTCG CTGCGGGAGA TCGCGCTCGA CGACGTACGC
CGCAGCGTCG GCCTGGTCGA CGACGACCCG CACGTGTTCG CCACGACCCT CGCCGAGAAC
GTGCGGCTCG CCCGTCCCGA GGCCAGCGAC GCCGAGGTCG AGGAGGCGCT GCGCCGGGCC
CGGCTGGGGG ACTGGCTGGA CTCGCTGCCG GCCGGGCTCG ACAGCTGGCT CGGCGACGGC
CACGCCGGGG TGTCCGGCGG CGAACGGGCC CGGATCGCGA TCGCCCGGTC CCTGCTCGCC
GACCAGCCGG TGCTGGTGCT CGACGAGCCG GCCGCGCACC TCGACGGAGC GACCGCGGAG
GCACTGGCCG CCGAGGTCCT CGACGGCGAG CAGCAGCGCA CGGTCCTGTG GATCACGCAC
GCCGCGGCCG GACTCGACCG GGTCGACCGC GTGCTCGACC TCGGGACTGG TAGAAAAGGG
GCATGA
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| Protein sequence | MRPGDPRIRR QLAPARPQLA VVLAAGVVGS VLLVAQAWVV TELVLAALHD GDVGRWAVLV
AVVFVARSLT GWTTDTMAAR AAAVVGTDVR RRVVGAILRS DGSRSSGELA TLATRGASAA
EPYLTRYVPA LVLAGVLPCV TLVAIATQDP MSALVVVGTL PLIPVFGILV GLATEDRARS
QWRALASLSG HFLDVMRGLP TLVAFRRAGA QAATIRAVTD RYRRRTMDTL RIAFVSSAIL
ELVATLSVAL VAVTVGLRLA QGSLDLETSL VVLLLAPEAY WPLRRVGAEF HAAAEGVATF
EAASELVDEP GPTDGVRRAG PMSLEGVTVL RPGRAVPALE DVTLTVPDRG VTALTGPSGC
GKSTLLAVLA GLLEPTSGVV RGPDRRRIAW LPQRPVFVAG TVADNLRLAV PDADEHRLWD
ALRRVALEER VRDLPAGLDT VLGEDGATLS AGERARLALA RVVLADRPWV LLDEPTAHLD
ALTEQVVADT VQELGLTRAV VVVAHRPALV ALADRVVVLT PPEVPEVVPT VEAAAARPTA
TEPPAEPRRR GLLLPTLVGG LASASGVALT ATAGWLIVQA SHQPPVLTLL VAIVGVRTFG
LARPALRYVE RLRSHDVVLR MLAERRVRVY ETVVPLTPGA LGRRRGDVLA AIVDDVDSVL
DRELRVRMPV RGALVVAALA LAVAAIIEPR SVPVVAGTCL VAGGLGYLLA RAGATRAERR
AVESRARLSE VVVEVTQTAS ELTLWQAERR ALSSVSAVSD ELGRAAVTAA TWLAWARAVV
LAVSGAGVAV MAWVLTPLVA DGALSGPMLA LLVLLPLALA EVASSVADAG ALSARTQAAE
ERLARIAATP PAVADPEDPV PADSRDRVGL ERVSAAWADR VVLEDLSLDL RPGDRVAVVG
PTGSGKSTLA SLLLRFVDPV RGRIVLGRRS LREIALDDVR RSVGLVDDDP HVFATTLAEN
VRLARPEASD AEVEEALRRA RLGDWLDSLP AGLDSWLGDG HAGVSGGERA RIAIARSLLA
DQPVLVLDEP AAHLDGATAE ALAAEVLDGE QQRTVLWITH AAAGLDRVDR VLDLGTGRKG
A
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