| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0844 |
|---|
| Symbol | |
|---|
| ID | 4597903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 882534 |
|---|
| End bp | 883688 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639775445 |
|---|
| Product | thiolase |
|---|
| Protein accession | YP_922054 |
|---|
| Protein GI | 119715089 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCG GCGTCGCCGT CGTCGGGGCG GCCGAGGCCG ACGACATCGG CGTCGTACCC
GGGAAGTCGT CGGTGCAGAT GCACGCCGAG GCCGCCGCCA ACGCGCTGGC CCACGCCAAC
CTCGGGTTGC GCGACGTCGA CGCCCTGTTC ACCTGTGGCC TGGACTTCAT GCCGTCCCTC
CTGGTCAGCG AGTACCTCGG CCTCCAGCCC CGCTACTCCA GCAGCAACTC GATCGGCGGC
TCGTCGTTCG TGGCCCATGT CCACGAGGCG GTCCTCGCCA TCCGGAGCGG ACGCTGCGAG
GTGGCTCTGG TCACTCACGG CGAGACCCGC CGCTCCAACC GGCGGCGCGG GGTTCAGGCC
CGGCCGCACC ACTTCGACCC GTGGCTTCCG GACTGGCAGT GGGAGCGTCC GTACGGCGTG
GCCGCGCCGC CCGCCGCCTA CGCCCTGGCG GCGACCCGCC ACATGCACGA GTACGGGACG
ACCACCAAGC ACTTCGCTGA GATCGCGGTC GCGACCCGGG CCTGGGCGGC GCTCAACCCG
CGGGCCTACC GGCAGGCGCT GCTGACGATC GACGAGGTGC TCGCCGCGCC GTACTTCGTC
TACCCGTTCC GCCCGACCGA CATCTGCCTG GTGACCGACG CCGGGGGCGC GGTCGTCCTG
ACGTCGACCG CTCGCGCCCG CGATCTCGGC GTACCCGTGG TCGAGGTGCT CGGCTCGGCG
GTCGCCCACA CGCACTACGG GATCTCGCAG ATGCCGGACC TCACGACGAC CCCGGCCGCC
GTCTCCGGTG CCGAGGCCTA CCGGGAGGCC GGGATCGGCC CCGATGACGT CGACGTGGCC
GAGCTCTACG ACTCCTTCAC CTACACCGCG CTCGTGCAGC TCGAGGACCT CGGATTCTGC
GCCAAGGGCG AAGGTGGGGA CTTCGTCTCC GGGCAGCGCA CCGCGCCCGG CGGCGACTTC
CCCCTCAACA CGAGCGGCGG CGGCCTCTCC TACACCCACC CCGGGATGTT CGGCATGTTC
CTGCTGATCG AGGCCGTCCG GCAGCTGCGG GGCGAGTGCG ACGACCGTCA GGTGCCGGCG
GCGGAGGTGG CCCTCGTCAA CGGCATGGGC GGCTATCTGT CCAGCTCCGC CACGGCGATC
CTGGGCAGGC GCTGA
|
|---|
| Protein sequence | MSTGVAVVGA AEADDIGVVP GKSSVQMHAE AAANALAHAN LGLRDVDALF TCGLDFMPSL
LVSEYLGLQP RYSSSNSIGG SSFVAHVHEA VLAIRSGRCE VALVTHGETR RSNRRRGVQA
RPHHFDPWLP DWQWERPYGV AAPPAAYALA ATRHMHEYGT TTKHFAEIAV ATRAWAALNP
RAYRQALLTI DEVLAAPYFV YPFRPTDICL VTDAGGAVVL TSTARARDLG VPVVEVLGSA
VAHTHYGISQ MPDLTTTPAA VSGAEAYREA GIGPDDVDVA ELYDSFTYTA LVQLEDLGFC
AKGEGGDFVS GQRTAPGGDF PLNTSGGGLS YTHPGMFGMF LLIEAVRQLR GECDDRQVPA
AEVALVNGMG GYLSSSATAI LGRR
|
|---|
| |