Gene Noca_0803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0803 
Symbol 
ID4598885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp846460 
End bp847596 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content68% 
IMG OID639775406 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_922015 
Protein GI119715050 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCA CGATGACAGC GGCGGAACTG CGATTTCGTG ACGAGTTGCG CGGGTGGCTC 
GCGGTGAACC CGCCAGGAGT GGCGCCGATG GGCGACGAGG CATCCTTCGA CTTCCGGCGA
GCGTGGCAGC GGCGGATGTA CGAGAGCGGC TGGGTCGGCA TCCACTGGCC CCGGGAGTAC
GGCGGCCGAG GAGCAAACCC GGTGGAGCTG GCGATCTTCA ACGAGGAGCT CGGACGTTCA
GGCGCGCCAC GCTTCGCGAA CACGATCGCC ATCGAGATGG GCGGTCCGAC GATCATCACA
CACGGCACGC CCGCCCAGAA GGAGCGGCTC CTGGAGCCGA TCCTGTCGGC CGAGGAGATC
TGGTGCCAGG CGTTCTCGGA ACCAGGAGCT GGTTCGGACC TCGCTTCCCT GCGCACCCGA
GCCGATCGCG TGCCCGGCGG CTTCCGGGTC ACCGGGCAGA AGGTCTGGAC CTCCCTGGCA
CGCCAGGCGA GCTGGTGCAT GATGCTGGCG CGCACGGATC CCGACAGCCA GGGACACCGC
GGCCTCACGT ACTTCCTGAT GGACATGCAG CAGGACGAGA TCGAACCCCG GCCGATCGTG
CAGGCAACCG GCGAGAGCGA GTTCAACGAG CTGTTCCTCG ACGGCGCTTA CGTGAGCGAC
GACCAGGTCG TGGGTGAGGT GGGCAAGGGC TGGCGGGTGG CCATCACCAC CCTGATGAAT
GAACGAGCCG GCCTCGCGCT CGCTGCCCAG GTCGACGTCC GACGGGCGCT CGACGAGGCG
AAGCGCCAGG TTGTGCTGTC GGGGCGCATG GACGATCCTC TCGTCCTGGA TCGGCTGGCG
GATCTCCATG TGAGGGCGGA GGGGCTCCGT CTGCAGACGT ACCGGGGGCT GAGTGATATC
GAGCGCACGG GCGCCCCGGG CCCCAGCGGA TCGCTGGCCA AGTTGCAGTG GGCCGCTGTG
AACCAGGCGG TGGCCGAGTT CACGATCGAC CTCCTGGGAC CGGCTGCTGT CGGCGCTGAC
TCCCCGGAGA TGTACCGCTA CCTGCGTTCG CGCGCCAACT CGATCGAGGG TGGCACCACC
GAGGTCCTCA AGGACATCGT CGCCGAGCGC GTCCTGAGCC TGCCGAGGTC CCGATGA
 
Protein sequence
MDFTMTAAEL RFRDELRGWL AVNPPGVAPM GDEASFDFRR AWQRRMYESG WVGIHWPREY 
GGRGANPVEL AIFNEELGRS GAPRFANTIA IEMGGPTIIT HGTPAQKERL LEPILSAEEI
WCQAFSEPGA GSDLASLRTR ADRVPGGFRV TGQKVWTSLA RQASWCMMLA RTDPDSQGHR
GLTYFLMDMQ QDEIEPRPIV QATGESEFNE LFLDGAYVSD DQVVGEVGKG WRVAITTLMN
ERAGLALAAQ VDVRRALDEA KRQVVLSGRM DDPLVLDRLA DLHVRAEGLR LQTYRGLSDI
ERTGAPGPSG SLAKLQWAAV NQAVAEFTID LLGPAAVGAD SPEMYRYLRS RANSIEGGTT
EVLKDIVAER VLSLPRSR