Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0679 |
Symbol | |
ID | 4597543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 719049 |
End bp | 720212 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639775280 |
Product | ABC-type sugar transport system periplasmic component-like |
Protein accession | YP_921892 |
Protein GI | 119714927 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAGA AGCCCCTGCG GCTGCTCGCA GCCGCCGTCG TCTCCGCCTC GCTCGCCCTC ACCGCGTGCT CGGCACCCGA GAGCACCGCC TCCGTGAGTG AGCAGGACGC CACGTCCGAG ATCGCAGTCG CGATGACGGA GCTCATCGAG CAGCACTCGA GCGCCCCCGA GTTCACGCCG CCCGGGCCGG CCGTCGACAC GTCGGCGTTG AAGGGCAAGA CGATCGCCAT CGTCGCCATC GACCTCCGAG TGCCGACCCT CGCCGACGTC GTGGCCAACG CCAAGGTCGC AGCCGGGTTG CTCGGGCTCA AGGTCACGGT CTTCGATGCG AAGAGCCAGG CGACCCTGAT GCGGCAGGGC ATGCAGCAGG CCATCGACAA CCGCGCGGAC GCGATCATCA GCGACGGGCT GGTCATGCAG GTGGTGGCCG ACCAGATCAA GGCCGCCAAG GACAAGGGGA TCCCGACCAT CGACGTGGTC AACAGCCCGC CGGTCGCGGA CGTGCCGGGT CAGGGCTCGG ACCCGAACAT CTTCGGCAAC GTCTCGCCCG ACGCCGAGCT GGGCGGACAG CTGATCGCCG CCGCCGCCAT CGCGAGCACC GACGGCGAGG CCAAGGTGCA GATCATGAAC ACCTCCGAGC TCACCGCCGC CCCGGCGATC GTCAAGGCGA TCGCCGAGAC CATCGAGAGC TGCGACACCT GTGAGGTCAT CTCCACGACC GACACTGCTC TCAACGACTG GTCGACCCAG ATCCCGGGGC TCACCGCGAC GCAGATCCGC AGCAACCCGG ACATCAACTT CATCCTCCCC ATCTACGACG CCATGGGCAT CTTCGCGACC ACCGGTGTGC AGCAGGCCGC CGCGACCGGC AAGACGCGGG TCGCCTCCCA GGACGGCAGC CCCGCGGCGC TGGCCCTGGT CAAGCAGGGG GACGTGTTCG TCGCCAACGT GGCCAAGAGC TCCGCATGGG CCGCGTGGGC CGCGGTCGAC CAGGCCATGC GCGGGATGCT GAAGATGGAG CCCGCGAACC CCGTCCTCCC CGTCCGGTTC GTCGACTCGG CCGCCCTGAA GGACGTCGAC ACCTCGACCT CGAAGTCGGT CGACGAGGCG CTCTTCGGAC CGGCCTACCA GGACGGCTAC AAGGAGCTGT GGGGCCTCTC CTGA
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Protein sequence | MSQKPLRLLA AAVVSASLAL TACSAPESTA SVSEQDATSE IAVAMTELIE QHSSAPEFTP PGPAVDTSAL KGKTIAIVAI DLRVPTLADV VANAKVAAGL LGLKVTVFDA KSQATLMRQG MQQAIDNRAD AIISDGLVMQ VVADQIKAAK DKGIPTIDVV NSPPVADVPG QGSDPNIFGN VSPDAELGGQ LIAAAAIAST DGEAKVQIMN TSELTAAPAI VKAIAETIES CDTCEVISTT DTALNDWSTQ IPGLTATQIR SNPDINFILP IYDAMGIFAT TGVQQAAATG KTRVASQDGS PAALALVKQG DVFVANVAKS SAWAAWAAVD QAMRGMLKME PANPVLPVRF VDSAALKDVD TSTSKSVDEA LFGPAYQDGY KELWGLS
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