Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0510 |
Symbol | |
ID | 4597409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 540289 |
End bp | 541902 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 639775124 |
Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase |
Protein accession | YP_921739 |
Protein GI | 119714774 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00338494 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCCC CTGAGCCCGC CCCGGAGTCC GCCACCGCCA CCGCCCGCCG GATCCTGGCG GCCCTGGTCG AGGCCGGCGT CACCGAGATC GTGGTCGCCC CCGGGTCGCG GAACGCGCCG CTGTCGTTCG CGGCGTACGA CGCCGCCGCC GCGGGCCTGG TCCGGCTGCA CACGCGCCTC GACGAGCGGA CCGCCGGCTT CCTCGCGCTC GGCCTCACCA GGAGCGGCCG GCGGGCAGCC GTGGTCTGCA CGTCCGGCAC CGCGGTCGCC AACCTGCACC CGGCGGTCCT CGAGGCGGCC CACGCCGGCG TCGACCTGGT CGTCGTGTCC GCCGACCGGC CGGCCCGGCT GCGCGGCACC GGCGCGAACC AGACCACCGA CCAGGTCGGC ATCTTCGGCC CCCTGGTTCC CACCCAGGAC GCCAGCGGCC CGGTCGAGCT GCTGACCGCG GGCCCGGTCC ATCTCAACGT CCCGCTCGAG GAGCCGCTCG TCCCCGACGA CCGCTGGCTC CCGGACGTGG TGCCGGGGGA GCCGGCCCAC CGGGTGATCC CCGCGTCCCT GACCGTGCTG GCGCGGGGGC CGCGCACGGT CGTGGTCGCC GGTGACGACG CCGGCCCGCG GGTCCGGGTC CTGGCCGAGC AGGCCGGCTG GCCGCTGCTC GCCGAGCCGT CCAGCGGGTC GCGCACCGGG GACAACGCGA TCCGCACCTA CCGGCTGCTG CTGGACGGCG ACCTCGGCGC GCGCGTCGAG CGGGTCGTGG TCGGCGGTCA CCCCACGCTG TCCCGCCCGG TCAGCCGGCT GCTGGCCCGA CCGGACGTGG AGGTGGTCGA CCTCGGTGCC TGGGGGGTCT GGAGCGAGCG ACCCTTCCCC GTGCACTCCC GGATCCTCGG TGGCGTCGGC GTCGACGCCC CGGTCGACGC GGCCGACGGC ACGGCCGACG ACACGGACTG GCTGGAGGAG TGGCGGACGG CGGACCGGGC GGTGTCCGCC CGGCTGGACG CGCTGCTCGC CGCCGAGCCC GGGCTCACGC CGCACGAGGT CGCGGGCGCG GTCGCCCGGG CCCTGCCCGC CGGCGGGCTG CTCGTCGTCG GCGCCTCGAG CCCGATCCGC GACCTGGACC TGATGGTGCC GCGCTACGAC GTGGGCGCCC GGCGCAAGGT GGTCGCCAAC CGCGGCCTCG CCGGCATCGA CGGCACCATC TCGACCGCGG TCGGCGCCGC CCTGGGCCGG CCGCGCAGCA CCCGCGCCCT GACCCTGATG GGGGACGTCA CGTTCCTCCA CGACGCCGGC GCGCTGGTGA TCGGGCCCGG TGAGGCGGTC CCCGACCTCA CGATCGTCGT GGTCAACGAC GACGGCGGTT CGATCTTCGC GATGCTCGAG CAGGGGGCGG CGGAGTACGC CGACCAGTAC GACCGGCTCT TCGGCACCCC GCACCGGGTC GACCTCGCCA GCCTCTGCGC CGCGACCCGC ACGCCCCACT GGCGGGTCGA CTCCCTGGCC GAGCTCGAGC ACGCCCTCGC CTCGCCCGCG GGCGGGATCG AGGTGGTGGA GGCCGTCGTA CGCCGCGACA ACCGGCGCGA CCTCGACGAG CGGATCCGCG CGCTGCGTCC CTGA
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Protein sequence | MTAPEPAPES ATATARRILA ALVEAGVTEI VVAPGSRNAP LSFAAYDAAA AGLVRLHTRL DERTAGFLAL GLTRSGRRAA VVCTSGTAVA NLHPAVLEAA HAGVDLVVVS ADRPARLRGT GANQTTDQVG IFGPLVPTQD ASGPVELLTA GPVHLNVPLE EPLVPDDRWL PDVVPGEPAH RVIPASLTVL ARGPRTVVVA GDDAGPRVRV LAEQAGWPLL AEPSSGSRTG DNAIRTYRLL LDGDLGARVE RVVVGGHPTL SRPVSRLLAR PDVEVVDLGA WGVWSERPFP VHSRILGGVG VDAPVDAADG TADDTDWLEE WRTADRAVSA RLDALLAAEP GLTPHEVAGA VARALPAGGL LVVGASSPIR DLDLMVPRYD VGARRKVVAN RGLAGIDGTI STAVGAALGR PRSTRALTLM GDVTFLHDAG ALVIGPGEAV PDLTIVVVND DGGSIFAMLE QGAAEYADQY DRLFGTPHRV DLASLCAATR TPHWRVDSLA ELEHALASPA GGIEVVEAVV RRDNRRDLDE RIRALRP
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