Gene Noca_0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0510 
Symbol 
ID4597409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp540289 
End bp541902 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content77% 
IMG OID639775124 
Product2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 
Protein accessionYP_921739 
Protein GI119714774 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 
TIGRFAM ID[TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00338494 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCC CTGAGCCCGC CCCGGAGTCC GCCACCGCCA CCGCCCGCCG GATCCTGGCG 
GCCCTGGTCG AGGCCGGCGT CACCGAGATC GTGGTCGCCC CCGGGTCGCG GAACGCGCCG
CTGTCGTTCG CGGCGTACGA CGCCGCCGCC GCGGGCCTGG TCCGGCTGCA CACGCGCCTC
GACGAGCGGA CCGCCGGCTT CCTCGCGCTC GGCCTCACCA GGAGCGGCCG GCGGGCAGCC
GTGGTCTGCA CGTCCGGCAC CGCGGTCGCC AACCTGCACC CGGCGGTCCT CGAGGCGGCC
CACGCCGGCG TCGACCTGGT CGTCGTGTCC GCCGACCGGC CGGCCCGGCT GCGCGGCACC
GGCGCGAACC AGACCACCGA CCAGGTCGGC ATCTTCGGCC CCCTGGTTCC CACCCAGGAC
GCCAGCGGCC CGGTCGAGCT GCTGACCGCG GGCCCGGTCC ATCTCAACGT CCCGCTCGAG
GAGCCGCTCG TCCCCGACGA CCGCTGGCTC CCGGACGTGG TGCCGGGGGA GCCGGCCCAC
CGGGTGATCC CCGCGTCCCT GACCGTGCTG GCGCGGGGGC CGCGCACGGT CGTGGTCGCC
GGTGACGACG CCGGCCCGCG GGTCCGGGTC CTGGCCGAGC AGGCCGGCTG GCCGCTGCTC
GCCGAGCCGT CCAGCGGGTC GCGCACCGGG GACAACGCGA TCCGCACCTA CCGGCTGCTG
CTGGACGGCG ACCTCGGCGC GCGCGTCGAG CGGGTCGTGG TCGGCGGTCA CCCCACGCTG
TCCCGCCCGG TCAGCCGGCT GCTGGCCCGA CCGGACGTGG AGGTGGTCGA CCTCGGTGCC
TGGGGGGTCT GGAGCGAGCG ACCCTTCCCC GTGCACTCCC GGATCCTCGG TGGCGTCGGC
GTCGACGCCC CGGTCGACGC GGCCGACGGC ACGGCCGACG ACACGGACTG GCTGGAGGAG
TGGCGGACGG CGGACCGGGC GGTGTCCGCC CGGCTGGACG CGCTGCTCGC CGCCGAGCCC
GGGCTCACGC CGCACGAGGT CGCGGGCGCG GTCGCCCGGG CCCTGCCCGC CGGCGGGCTG
CTCGTCGTCG GCGCCTCGAG CCCGATCCGC GACCTGGACC TGATGGTGCC GCGCTACGAC
GTGGGCGCCC GGCGCAAGGT GGTCGCCAAC CGCGGCCTCG CCGGCATCGA CGGCACCATC
TCGACCGCGG TCGGCGCCGC CCTGGGCCGG CCGCGCAGCA CCCGCGCCCT GACCCTGATG
GGGGACGTCA CGTTCCTCCA CGACGCCGGC GCGCTGGTGA TCGGGCCCGG TGAGGCGGTC
CCCGACCTCA CGATCGTCGT GGTCAACGAC GACGGCGGTT CGATCTTCGC GATGCTCGAG
CAGGGGGCGG CGGAGTACGC CGACCAGTAC GACCGGCTCT TCGGCACCCC GCACCGGGTC
GACCTCGCCA GCCTCTGCGC CGCGACCCGC ACGCCCCACT GGCGGGTCGA CTCCCTGGCC
GAGCTCGAGC ACGCCCTCGC CTCGCCCGCG GGCGGGATCG AGGTGGTGGA GGCCGTCGTA
CGCCGCGACA ACCGGCGCGA CCTCGACGAG CGGATCCGCG CGCTGCGTCC CTGA
 
Protein sequence
MTAPEPAPES ATATARRILA ALVEAGVTEI VVAPGSRNAP LSFAAYDAAA AGLVRLHTRL 
DERTAGFLAL GLTRSGRRAA VVCTSGTAVA NLHPAVLEAA HAGVDLVVVS ADRPARLRGT
GANQTTDQVG IFGPLVPTQD ASGPVELLTA GPVHLNVPLE EPLVPDDRWL PDVVPGEPAH
RVIPASLTVL ARGPRTVVVA GDDAGPRVRV LAEQAGWPLL AEPSSGSRTG DNAIRTYRLL
LDGDLGARVE RVVVGGHPTL SRPVSRLLAR PDVEVVDLGA WGVWSERPFP VHSRILGGVG
VDAPVDAADG TADDTDWLEE WRTADRAVSA RLDALLAAEP GLTPHEVAGA VARALPAGGL
LVVGASSPIR DLDLMVPRYD VGARRKVVAN RGLAGIDGTI STAVGAALGR PRSTRALTLM
GDVTFLHDAG ALVIGPGEAV PDLTIVVVND DGGSIFAMLE QGAAEYADQY DRLFGTPHRV
DLASLCAATR TPHWRVDSLA ELEHALASPA GGIEVVEAVV RRDNRRDLDE RIRALRP