Gene Noca_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0504 
Symbol 
ID4597403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp535397 
End bp536422 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content71% 
IMG OID639775118 
Productcytochrome c assembly protein 
Protein accessionYP_921733 
Protein GI119714768 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR03144] cytochrome c-type biogenesis protein CcsB 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0350668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACG TGCAGTGGGA GAGCCTGAGC AACTGGGCGG TGGCCGCCAG CGGGGTCGTG 
TACTTCCTCG CGCTGCTGGT GCACCTCGCC GAGTGGGCGT CCTTGCGCAA GGTCCCGGTC
GCGGCCGGTG CCGCGGTGAC GTCCTCGGTG GACATCCCGG GTGGGATCGC CGTGGCCACC
GGTCCCGGCG GCGAGGGCGA CGGCCAGGAC GAGGGGAAGG TGCGGCGCAC CGAGTTCCTC
GGCCGCCTGG GCTACCTGCT CACCGTCCTC GCGGTGGCCG TCCAGCTCGT GGCGCTCGTG
GGGCGCGGCA TGGCCGCCGA CCCGGACCGG GTGCCGTGGG GCAACATGTA CGAGTTCACC
CTCACGGGGA CCTTCGTGGT CGCCGCGCTG TACGTCGCGC TCTACCACAA GCTGCGGCTC
GCCTGGATGG CGCCGATCGT GGTCGCTTTC GTGCTCAGCG TGCTGATGGT CGCGGTGATC
TGGCTCTACG CCCCCGTCGC CCCGCTGACC GAGGCGCTCT CGTCGTACTG GCTGGTGATC
CACGTGGTCT CCGCGATCAT CGCCACCGGC GCGTTCACCC TCGGCGGGAT CACCTCCGCG
CTGTACCTCG TGAAGGCGCG CGCGCCGGAG CGAGAGTCCG GGTACGTCGC GCGGCTGCCG
CGGCCCGAGG TGCTCGACCG GGTCTCCTAC CGGCTGCACG CGTTCGGCTT CCCGGTGTGG
ACGTTCGCGG TGCTGATCAC CGGCCCGATC TGGGCGCACC AGGCCTGGTC GTCGTACTGG
AACTGGGACC CCAAGGAGGT CTGGGCGTTC ATCACCTGGG TCGTCTACGC GGCGTACCTC
CACGCGCGCA CCACCGCCGG CTGGAAGGGC CGCAACGCCG CGATCCTCGC CCTGGTCGGC
GTCGCCACGC TGTGGTTCAA CTTCATCGGC ATCAACTACT TCTCGACCAC CAGCCAGCAC
TCCTACGCCG GCGGCGCACC CGCGCTGGTC GAGCCGGCCG CTCCCCAATC CGACGCACTC
GGGTAG
 
Protein sequence
MTDVQWESLS NWAVAASGVV YFLALLVHLA EWASLRKVPV AAGAAVTSSV DIPGGIAVAT 
GPGGEGDGQD EGKVRRTEFL GRLGYLLTVL AVAVQLVALV GRGMAADPDR VPWGNMYEFT
LTGTFVVAAL YVALYHKLRL AWMAPIVVAF VLSVLMVAVI WLYAPVAPLT EALSSYWLVI
HVVSAIIATG AFTLGGITSA LYLVKARAPE RESGYVARLP RPEVLDRVSY RLHAFGFPVW
TFAVLITGPI WAHQAWSSYW NWDPKEVWAF ITWVVYAAYL HARTTAGWKG RNAAILALVG
VATLWFNFIG INYFSTTSQH SYAGGAPALV EPAAPQSDAL G