Gene Noca_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0448 
Symbol 
ID4597347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp479166 
End bp479735 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content71% 
IMG OID639775062 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_921677 
Protein GI119714712 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGAGA CCCCGAACCC GAACATCATC GACGCGGACA CGCTGACCGG CGAGATGCGG 
CCGATCCGCC GTGCGGTGCT GGCACTCGGG TCCAACCTGG GTGAGCGGAT GGGGAACCTC 
CAGGGCGCGC TGAACGCGCT GGCCGACACC CCAGACGTCT GGATCACCGC CGTGTCCCCG 
GTCTACGAGA CCGACCCCGT CGACTGCCCG CCCGAGGCGA AGACGTTCCT CAACGCCGTC 
GTGCTGATCG ACACCACGCT GGCCGCGAGC CGGCTGATGG ACCGGGCGCT GGCGATCGAG 
GACGCCTTCG AGCGGGAGCG CGGTGAGCAG CGCAACGCGC CGCGGACCCT CGACGTCGAC 
CTGATCGTCG TCGGCGACCG GCGCAGCAAC GAGGAGTTCC TGCGGCTGCC GCACCCGCGG 
GCCGCCGAAC GGGCCTTCGT GCTGCGCCCG TGGTTCGACG TCGACCCGGC GGCCGAGGTG 
CCCGACCGGG GTCCGGTCGC GGACCTGCTC GATGGGACCG ACCAGAGCGG GCTGAAGCTG 
CGCGACGACC TGGTCCTCGA GATCCAGTGA
 
Protein sequence
MTETPNPNII DADTLTGEMR PIRRAVLALG SNLGERMGNL QGALNALADT PDVWITAVSP 
VYETDPVDCP PEAKTFLNAV VLIDTTLAAS RLMDRALAIE DAFERERGEQ RNAPRTLDVD 
LIVVGDRRSN EEFLRLPHPR AAERAFVLRP WFDVDPAAEV PDRGPVADLL DGTDQSGLKL 
RDDLVLEIQ