Gene Noca_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0415 
Symbol 
ID4597727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp448056 
End bp448667 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID639775030 
Producthypothetical protein 
Protein accessionYP_921645 
Protein GI119714680 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.237491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCGG TACTGGTGCC GCCGCCGCAC ACGCGGCTGG AGGACCTGCT GAGCCTGGTC 
ACGGGCGTCT ACGTCGTCTC CCTCGGCCTG AGCTTCCTCC AGGCCTCAGG GGCGGTCACG 
GGCGGCACCG CCGGTCTCGC CCTGCTGCTC TCCTATGCGA CCCCGATCGG GTTCGGCGTG 
CTGTTCGTGC TGATCAACCT GCCCGCGTTC GCGGTGGCCG CGTGGAAGAA GGGCTGGCCG 
TTCACGGTGA AGTCGCTCGC CTGCGTCGTC GGGGTGTCGT TCGCGACCCG GCTGCAGGCG 
GAGGTGCTGG ACCTGCCCGA CCTCGACAAG CTCTACGGGG TGGTCGCGGG CAACCTGCTG 
GCCGGCGTGG GCCTGCTGAT CCTGTTCCGG CACGGGGCGA GCCTGGGCGG CTTCAACATC 
ATCGCGCTGC TCATGCAGGA GAAGCTCGGC CTCCGGGCCG GCTACGTGCA GATGGTCCTC 
GACGTGATGG TCGTGCTCGG GTCCGCGTTC GTCGTCGACC CGGGCATCGT GGTGCTCTCG 
GCGCTCGGCG CCGTCGTGCT CAACATCGTG CTGGCCTTCA ACCACCGGCC GGGCCGGTAC 
ATGGGCCTCT GA
 
Protein sequence
MSSVLVPPPH TRLEDLLSLV TGVYVVSLGL SFLQASGAVT GGTAGLALLL SYATPIGFGV 
LFVLINLPAF AVAAWKKGWP FTVKSLACVV GVSFATRLQA EVLDLPDLDK LYGVVAGNLL 
AGVGLLILFR HGASLGGFNI IALLMQEKLG LRAGYVQMVL DVMVVLGSAF VVDPGIVVLS 
ALGAVVLNIV LAFNHRPGRY MGL