| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0370 |
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| Symbol | |
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| ID | 4597756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 393742 |
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| End bp | 396078 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639774984 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_921600 |
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| Protein GI | 119714635 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0213184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAGCGG TCCTCGGTTC GCAGGCGCGC ACCGCCGGTG ACCTCCGCGA CGTGGTCGAG
CGGCTCGTGG CCGCGCCGGG CCGCGAGGAC CGGCTGTGCC ACCTGGAGGT GCTCCCGGCG
CGGGCGGCGC GCCACGCGGA CTGGCCCGCC TGGGCGGACC CGGACGTGGT CGCGGCGTTC
GCGGCGCGCG GGGTCGCGCG CCCCTGGCAG CACCAGGTCG TGGCCGCCGA GGCGGCGCAC
GCCGGCCAGC ATGTCGTGCT CGCGACCGGC ACCGCCTCCG GCAAGAGCCT GGCCTACCAG
CTCCCCGCGC TCTCGACCCT CCGCGGCTCC CGGGGGCCGC GCGGCCAGCG CGGGGCCACC
GTGCTGTACC TCGCACCGAC CAAGGCGCTC GCCCAGGACC AGCTGGCCGG GCTGAGCGGG
CTCGGGCTCG ACCTGCGGGT CACCACCCAT GACGGCGACA GCTCACGCGA GCAGCGCGAC
TGGGCCCGCG ACCACGGCGA GTACGTCCTC ACCAACCCCG ACATGCTGCA CCGCTCCCTG
CTGCCCGGGC ACTCCCGCTG GGCGGGGTTC CTCGGCGCCC TGCAGTACGT CGTCGTCGAC
GAGTGCCACC ACTACCGCGG GGTCTTCGGC GCTCACGTCG CCCACGTGCT CCGACGGCTG
CGGCGGGTGT GCGCGACGTA CGGCGCGAGC CCGACCTTCG TGCTGGCCTC CGCCACCGTC
GCGGAGCCCG AGGCCGCCGC CCGGCGGCTC ACCGGCCTCG ACGTGCAGGC GGTCACCGCC
GACCACTCTC CGCGCGGCCG GGTGTCACTG CTGCTGTGGG AGCCGCCCTT CACCTCCTTC
ACCGGCGAGA ACGGCGCGCC CGTGCGCCGG GCCGCCTCCT CCGAGACCGC CGACCTGCTC
GCCGACCTGG TGGCCGAGGA CGTGCGCACG CTCGCGTTCA TCCGCTCCCG CCGCGGTGCC
GAGCAGGTCG CGATGACCGC CGCCGAGCTG CTCACCGACG TCGACCCGGT GCTCGCAGGC
CGGGTGGCGT CCTACCGCGG CGGCTACCTG CCCGAGGAGC GTCGGGCGAT CGAGGACTCG
CTGCGTCGCG GCGAGATCAC CGGGCTCGCC GCGACCAACG CCCTCGAGCT CGGCATCGAC
ATCAGCGGCC TCGACGCCGT GGTGATGGCC GGCTTCCCCG GCACCCGCGC CGCCCTGTGG
CAGCAGGTCG GCCGGGCCGG GCGGGGCGCC CAGGACGCCC TCGCCGTCCT CGTCGCCCGC
GACGACCCGC TCGACACCTA CCTCGTCACC CACCCCGAGG CGCTGCTGGG CCGCCCGGTC
GAGGCGACCG TGTTCGACCC GTCCAATCCC TACGTCCTCG GTCCGCACCT GTGCGCGGCC
GCACACGAGG CACCGCTCAC CGAGGCCGAC CTGCCGCTGT TCGGTCCGAC CGCGCGCGAG
GTCGTCGACG CGCTGACCGA GGGCGGGCTG CTGCGCCGCC GCCCGCGCGG CTGGTTCTGG
ACCGACCGGC GCCGGGCCAG CGACCTCGCC GACATCCGGT CGACCGGCGG CGCTCCCGTC
CAGCTCGTCG AGGCGGAGAC GGGCCGCGTG ATCGGCACGG TCGACGCCTC GAGCGCCCAC
GGCACCGCCC ACCCCGGCGC GGTGTACGTG CACCGCGGCG AGACCTGGTT GGTGTGCTCG
CTCGACCTCG AGGACCGCGT GGCGGTGATC CAACGCGCCC AGCCCGACTA CTCCACGACC
GCCCGCGAGG TCACCGAGAT CTCGGTCGTG CGCGAGCGTG AGCACACCGC CTGGGGTGAC
TGCCGGCTGT CCTTCGGCGA GGTCGACGTC ACCCACCAGG TGGTGTCCTT CCTCAAGCGG
CGCCAACCCG GCGGCGACGT GCTCGGCGAG GAGCCGCTCG ACCTGCCCGA GCGCTCGTTG
CGCACGGCGG CCGTGTGGTG GACGGTGCCC GACCACGCCG TGACCGAGGC GGGCCTCTCC
GGCCGTGACC TGCCGGGTGC CGCGCACGCC GCCGAGCACT GCTCGATCGG TCTGCTGCCG
CTCTTCGCGA CCTGCGACCG GTGGGACATC GGCGGAGTGT CGACGGCGGT GCACCCCGAC
ACCGGGCGAC TGACGGTGTT CGTCTACGAC GGGCACCCCG GTGGCGCGGG ATTCGCCGAG
CGCGGATTCC GAGCGGCCCG GGAGTGGCTG ACGGCGACCC GGGACACGAT CCGCTCGTGC
ACCTGCGAGG ACGGCTGCCC GTCGTGCATC CAGTCGCCCA AGTGTGGCAA CCAGAACAAC
CCGCTCGACA AGGCGGGCGC CGCCGCACTC CTCGACGTAC TCCTCGGCGA GGCCTAG
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| Protein sequence | MRAVLGSQAR TAGDLRDVVE RLVAAPGRED RLCHLEVLPA RAARHADWPA WADPDVVAAF
AARGVARPWQ HQVVAAEAAH AGQHVVLATG TASGKSLAYQ LPALSTLRGS RGPRGQRGAT
VLYLAPTKAL AQDQLAGLSG LGLDLRVTTH DGDSSREQRD WARDHGEYVL TNPDMLHRSL
LPGHSRWAGF LGALQYVVVD ECHHYRGVFG AHVAHVLRRL RRVCATYGAS PTFVLASATV
AEPEAAARRL TGLDVQAVTA DHSPRGRVSL LLWEPPFTSF TGENGAPVRR AASSETADLL
ADLVAEDVRT LAFIRSRRGA EQVAMTAAEL LTDVDPVLAG RVASYRGGYL PEERRAIEDS
LRRGEITGLA ATNALELGID ISGLDAVVMA GFPGTRAALW QQVGRAGRGA QDALAVLVAR
DDPLDTYLVT HPEALLGRPV EATVFDPSNP YVLGPHLCAA AHEAPLTEAD LPLFGPTARE
VVDALTEGGL LRRRPRGWFW TDRRRASDLA DIRSTGGAPV QLVEAETGRV IGTVDASSAH
GTAHPGAVYV HRGETWLVCS LDLEDRVAVI QRAQPDYSTT AREVTEISVV REREHTAWGD
CRLSFGEVDV THQVVSFLKR RQPGGDVLGE EPLDLPERSL RTAAVWWTVP DHAVTEAGLS
GRDLPGAAHA AEHCSIGLLP LFATCDRWDI GGVSTAVHPD TGRLTVFVYD GHPGGAGFAE
RGFRAAREWL TATRDTIRSC TCEDGCPSCI QSPKCGNQNN PLDKAGAAAL LDVLLGEA
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