Gene Noca_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0358 
Symbol 
ID4595652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp383448 
End bp384572 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content73% 
IMG OID639774973 
Producthistidine kinase internal region 
Protein accessionYP_921589 
Protein GI119714624 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGCCA TGACTCGCCC GTGGCGTCGC CGGCATCTCG GGACGGAGGC CGACCGGGCC 
ACGTTCCGCA CGCTGCACAC GGCCTCGCTC GCCTCGCCGG CGCTGCGGGA GGGGCTGACC
CGCACCAGCG CCGAGCGCAG CATCCGCCAC CTGCACGACC TGCTCGGCGG CCCGGCCCTC
GCGCTCACCG ATACCGCCAC GACGCTCGCC TGGCACGGCA CCGGGCAGCA CCACGAGGAG
CAGTGTCCGG GGCTCGCGGT CGCGACGGTC GAGCGCGGGC GCACCCGGAT GTTCGACCGC
GAGGAGCTGC CGTGTGATGT GTCCGGCTGT CCGGTCCGCT CCGCGATCGT CAGCCCGCTC
GTCGTCGAGG AGCGGGTGAT CGGCACGCTG CAGGTCTTCC CTGCCTATGC GACCGCGGGC
CTGGCCCGGG CGGCCGACGA GGTCGCCCAG TGGGTCAGCT CGCAGCTCGA GCTCGCCGAG
CTCGACGCGT CCCGGAACCG GCTGATGGAG GCCGAGGTCC GTGCCCTGCG GGCCCAGATC
AGCCCACACT TCATCTACAA CTCGCTGGGC GCCATCGCGA GCTTCGTGCG CACCGACCCC
GACCGGGCCC GGGACCTGCT CCTGGAGTTC GCGGACTTCA CCCGCTACTC GTTCCGCCGG
CACGGCGAGT ACACGACGCT CGCCGAGGAG CTGCGCTCGG TGGAGCGCTA CCTGCTGCTG
GAGCAGGCCC GGTTCGGCGA CCGGCTCCAG GTGACGCTGC GCATCGCGCC CGAGGTGCTC
CCGGTCGCCG TACCCTTCCT CTGCATCCAG CCGCTCGTCG AGAACGCCGT CCGGCACGGC
CTCGAGACGG CGGAGCGCGG CGGTCACATC CGGATCGTCG CCCGCGACCA GGGCCAGGAG
TGCGTGATCG AGGTGGAGGA CGACGGCACG GGCGAGGACC CCGACGTCGT ACGGCGCGCC
CTCGCGGGCG ACGCCGCCCT CGACTCCACC GGCCTGGGCA ACGTCGACGG CCGGCTCCGC
AACGCCTTCG GCGACGACTT CGGCCTCGCG GTGGAGACCG CACCGGGCGC GGGCACCAAG
GTCGTGGTCA GGGTGCCGAA GTTCGCTCCC GGGGTGCACG CGTGA
 
Protein sequence
MSAMTRPWRR RHLGTEADRA TFRTLHTASL ASPALREGLT RTSAERSIRH LHDLLGGPAL 
ALTDTATTLA WHGTGQHHEE QCPGLAVATV ERGRTRMFDR EELPCDVSGC PVRSAIVSPL
VVEERVIGTL QVFPAYATAG LARAADEVAQ WVSSQLELAE LDASRNRLME AEVRALRAQI
SPHFIYNSLG AIASFVRTDP DRARDLLLEF ADFTRYSFRR HGEYTTLAEE LRSVERYLLL
EQARFGDRLQ VTLRIAPEVL PVAVPFLCIQ PLVENAVRHG LETAERGGHI RIVARDQGQE
CVIEVEDDGT GEDPDVVRRA LAGDAALDST GLGNVDGRLR NAFGDDFGLA VETAPGAGTK
VVVRVPKFAP GVHA