Gene Noca_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0345 
Symbol 
ID4597982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp365914 
End bp367218 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content74% 
IMG OID639774960 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_921576 
Protein GI119714611 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGCC GCCGCCCGAC CCGCCCCCGC CTGTTCTCGC GAGGGTCGTT CCTCGAGAGC 
TCCCGGGTCG CCGACATCCT CCGCGCGGAG ACCACCGGCG GCCTGCTGCT GATCGCCGCC
GCCACGGTGG CGATCGTGTG GGCGAACACC CCCTGGTCGG CGTCGTACGC CGACCTCCGC
GACCTGCGGG TCGGTCCGCA GGCGTGGCAC CTCGACCTCA CCCTGGGCGC CTGGGCGGCC
GACGGCCTGC TGGCGATCTT CTTCTTCGTG GCCGGCCTGG AGCTCAAGCG GGAGTTCGTG
GCCGGCGACC TCCGGGACCC GCGCCGGGCG GCGCTGCCCG TGGTCGCCGC CATGGGCGGG
ATGGCGGTGC CCGCGCTCGT CTACGTGCTG TGGAACCTCG GCGGGGACGG GGCGCTGCAG
GGCTGGGCGA TCCCCACGGC GACCGACATC GCGTTCGCCG TCGCCATCCT CGCGGTGATC
AGCACCCACC TGCCCACGGG CCTGCGGACG TTCCTGCTGA CCCTGGCGGT CGTCGACGAC
CTGTTGGCCA TCACGATCAT CGCGCTCTTC TACACCGACG AGCTGCACCT GGGCTACCTC
GCGGCCGCCG CCGTCCCCCT CCTGGTCTTC GCGCTGCTGG TGCAGCGACG GATCCACCGC
GGCTGGCTGC TGATCCCCCT GGCCGCCACC GCCTGGGTCC TGGTGCACGA GTCGGGCGTG
CACGCGACCG TCGCCGGGGT GCTGCTCGGC TTCGCCGTCC CGGTGCTGCG CTCGGACGGC
CAGGAGGGGC CCGGGCTCGC CGAGCACCTC GAGCACCTGG TCCGGCCGCT CTCGGCCGGC
CTCGCCGTAC CCGTGTTCGC GTTCTTCGCC GCCGGGGTCA CCGTCGGGGG GTTCGACGGG
CTCGTGGACG CGCTCTCCGA CCCGGTCGCG CTCGGCGTCG TCACCGGCCT GGTCGTCGGC
AAGACCGTCG GGATCGCCGG CTCCACGTGG TTGCTCGCGA CCTTCACCCG CGCCGACCTC
GACGACCAGC TGAGCTGGGT CGACGTGGTC GGCCTGGCGA TGCTCGCCGG CATCGGCTTC
ACCGTCTCGC TGCTGATCGG CGAGCTCGCG TTCGGCAGCG GCACCCCCCG GGACGATCAC
GTGAAGGTGG GCGTGCTCGT CGGCTCGCTG GCCGCCACGG CCCTCGCGAC AGGGGTGCTG
CGGATGCGCA ACCGCGCCTA CCGGCGGCTG GTCGAGATCG AGGAGCAGGA CGCCGACGCG
GACGGGGTCC CCGACGTCTA CCAGCGCGAC GCCGACGAGG GGTGA
 
Protein sequence
MTGRRPTRPR LFSRGSFLES SRVADILRAE TTGGLLLIAA ATVAIVWANT PWSASYADLR 
DLRVGPQAWH LDLTLGAWAA DGLLAIFFFV AGLELKREFV AGDLRDPRRA ALPVVAAMGG
MAVPALVYVL WNLGGDGALQ GWAIPTATDI AFAVAILAVI STHLPTGLRT FLLTLAVVDD
LLAITIIALF YTDELHLGYL AAAAVPLLVF ALLVQRRIHR GWLLIPLAAT AWVLVHESGV
HATVAGVLLG FAVPVLRSDG QEGPGLAEHL EHLVRPLSAG LAVPVFAFFA AGVTVGGFDG
LVDALSDPVA LGVVTGLVVG KTVGIAGSTW LLATFTRADL DDQLSWVDVV GLAMLAGIGF
TVSLLIGELA FGSGTPRDDH VKVGVLVGSL AATALATGVL RMRNRAYRRL VEIEEQDADA
DGVPDVYQRD ADEG