Gene Noca_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0317 
Symbol 
ID4597953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp340151 
End bp342187 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content76% 
IMG OID639774931 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_921548 
Protein GI119714583 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGTCAC CCCTCGCGCT GTACCGCCGC TACCGGCCCG AGACCTTCGC GGAGGTCATC 
GGGCAGGCCC ACGTGACGGA GCCGCTGCGG GTGGCGCTGG CCAACAACCG GGTCAACCAC
GCCTACCTGT TCTCCGGACC GCGCGGCTGC GGGAAGACCA CCTCGGCGCG GATCCTCGCC
CGAGCCCTGA ACTGCGACCA GGCACCGGTG GCCGACCCCT GCGGCGAGTG CGAGAGCTGC
CGCGACCTGG CCCGCGGCGG TCCGGGCTCG ATCGACGTCA TCGAGATCGA CGCCGCCTCG
CACGGTGGCG TCGACGACGC GCGGGACCTG CGGGAGAAGG CGTTCTTCGC GCCGGTGCGC
AGCAAGTACA AGGTCTACAT CATCGACGAG GCCCACATGG TCACCACGCA GGGCTTCAAC
GCCCTGCTCA AGCTCGTCGA GGAGCCGCCG CCGCACCTGC GCTTCATCTT CGCGACCACC
GAGCCGGACA AGGTGCTGCC GACGATCCGC TCGCGCACCC ACCACTACCC GTTCCGGCTG
ATCCCGCCGC GGCTGCTCTC GTCGTACCTC TCCGAGCTGT GTGCCAAGGA GGGCGTGGCC
ATCGATCCTG CCGCGCTCCC GCTGGTCGTG CGGGCCGGTG GCGGATCGGC GCGCGACACC
CTGTCGGTGC TCGACCAGCT GCTCGGTGGC GCCGGTCCCG CCGGCGTGAC CCACGAGCTG
GCAGCCGGCC TGCTCGGCTA CACGCCCGAC ACGCTGCTCG ACGAGGTCGT CGACGCGTTC
GCGGCCGGTG ACGGTGCGGC CGTGTTCCGC GTGGTCGACA AGGTCGTCGA GACCGGCCAG
GACCCGCGCC GGTTCACCGA GGACCTGCTG CGCCGGCTGC GCGACCTGGT GATCGTCGCG
GCGGTGCCCG ACGCGCCCGC GACCGGGCTG ATCGACGTCT CGGAGGACCA GGGCGAGCGG
CTGGTGGCCC AGGCCGCCCG CTTCGGCGCC GCCGAGCTGA GCCGGGCCGC CGACATCGCC
GCGACCGGGC TGACCGAGAT GCGCGGCGCC ACGGCGCCCC GCCTGCTGCT CGAGCTGCTC
TGCGCCCGGA TCCTGCTGCC GGGGGCCGAC CACGCCACGG ACGGGGTGCT GGCGCGGCTC
GACCGGCTCG AGAAGCGGTT GACGATCACC GGCGTCCCGA CCCCGACCGC CGCCGCGCCC
GCGCCCCCCG CCCAGGACCG GCCGACCCCG CCGCCCGCAC GCCCGGCCGC GCCGGACCCG
GCGGCCGAGC GGCCCGACCC CGTGGCCGCG CCGCCGCCGG CTGCCCCGCC CGCGCCGCAA
GCGCCTCCTG TCTCCGCGCC CACGGCTGAG CCGGAGCCGG CCGCCGAGCC GCCCATGGCC
GAGCCGCCCG TCGCCGAGCA GACATCGGCC GAACCGGCCG AGCCGCCACC GGCGAGCGCT
CCCGCGGGAG CCGCGGGTGG GTTGACGCTG GTCGACGTAC GCCGGCTCTG GCCCGACATC
GTCGACGCCA CGAAGCTGCG CCGGCGGGTC GCCTGGATGC ACCTCACCCA GAACTGCCAG
GTCGTGGGGG TCGACGGCCA GACCCTGACC CTCGGGTTCA CCAACGCGGG TGCGCGGGAC
TCCTTCGTCA ACGGCGGCTG CGACGAGGTG CTGCGCCAGG CCGCCATCGA CGTGGTCGGT
GCCGACTGGC GGATCGAGAC GATCATCGAC CCCGGCGCGC GTGCGGATGT CCCGGTCGTG
ACCACCCCGG CGGTTCCCGC CGCGGACCCG GCGCCCGCGC CGGAGGCCGG CCCGCCGGCC
GAGGAGGCCC CGCAGCCACG GCGCACGAGC GACCCCGAGT CGATCGCGGC CGCTCGGGAG
GCGATCCAGC AGACCCGCGC CGGTGACGAG CCCCGGCCCG AGGGGCCGGA CTGGGCGGCC
GCCGACGCCG ACGCCCACCC CGACGACCTC GACGCCGACC AGCAGGGCAT GAGCACCGCC
GAGCTGCTCC AGCGCGAGCT CGGCGCGCAG ATGATCGAGG AGATCCGCCA CCAGTGA
 
Protein sequence
MESPLALYRR YRPETFAEVI GQAHVTEPLR VALANNRVNH AYLFSGPRGC GKTTSARILA 
RALNCDQAPV ADPCGECESC RDLARGGPGS IDVIEIDAAS HGGVDDARDL REKAFFAPVR
SKYKVYIIDE AHMVTTQGFN ALLKLVEEPP PHLRFIFATT EPDKVLPTIR SRTHHYPFRL
IPPRLLSSYL SELCAKEGVA IDPAALPLVV RAGGGSARDT LSVLDQLLGG AGPAGVTHEL
AAGLLGYTPD TLLDEVVDAF AAGDGAAVFR VVDKVVETGQ DPRRFTEDLL RRLRDLVIVA
AVPDAPATGL IDVSEDQGER LVAQAARFGA AELSRAADIA ATGLTEMRGA TAPRLLLELL
CARILLPGAD HATDGVLARL DRLEKRLTIT GVPTPTAAAP APPAQDRPTP PPARPAAPDP
AAERPDPVAA PPPAAPPAPQ APPVSAPTAE PEPAAEPPMA EPPVAEQTSA EPAEPPPASA
PAGAAGGLTL VDVRRLWPDI VDATKLRRRV AWMHLTQNCQ VVGVDGQTLT LGFTNAGARD
SFVNGGCDEV LRQAAIDVVG ADWRIETIID PGARADVPVV TTPAVPAADP APAPEAGPPA
EEAPQPRRTS DPESIAAARE AIQQTRAGDE PRPEGPDWAA ADADAHPDDL DADQQGMSTA
ELLQRELGAQ MIEEIRHQ