Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0312 |
Symbol | |
ID | 4597946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 332756 |
End bp | 333457 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639774925 |
Product | response regulator receiver |
Protein accession | YP_921543 |
Protein GI | 119714578 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0102436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGGTC GGCGCGCCCT GGTGGTCGAG GACGAGCCGG AGCTGGCACG GCTGGTCGGC AGCTACCTCG AGCGCGACGG GTTCGCGGTC ACGATCGTCC ACGACGGTCT CGAGGCGGTG GCGCGCTCGC GCGAGGTCGA CCCGGACGTG GTGGTCCTCG ACCTGGGTCT GCCGGGCCTC GACGGTGTGG AGGTGTGCCG CCGCCTGCGG ACGTTCTCCG ATGGGTACGT CGTGATGCTC ACCGCCCGCA GCGACGAGGT CGACACGCTG ATCGGTCTGT CGGTCGGCGC CGACGACTAC CTGACGAAGC CGTTCAGCCC GCGGGAGCTG GTCGCTCGCG TCCAGGCGAT GCTCCGGCGT CCGCGGCCGC TCGGCCACAT GGATGCCGAC GCCGGGGAGG CCCTCTCGTT CGGGGACCTG ACCATCGAGC TGGCCGGGCG CGACGTGTGG CTCGAGGACC GCGCGGTCCC GCTCACCCGC ACCGAGTTCG ACCTGCTTGC GACCCTGGCC CAGCGGCCGG GCATGGCCTT CAGCCGTCGC CAGCTGATCG ACGCGGTCTG GGGACCCGCT TGGGTCGGCG ACGAGCACCT CGTCGACGTC CACGTCGGCC ACCTGCGGCA CAAGCTCGGC GACTCCGCGG CCGAGGGCAG GTACGTCCGG ACGGTCCGGG GAATCGGCTA CCGGATGGGG CGGGGGGCAT GA
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Protein sequence | MSGRRALVVE DEPELARLVG SYLERDGFAV TIVHDGLEAV ARSREVDPDV VVLDLGLPGL DGVEVCRRLR TFSDGYVVML TARSDEVDTL IGLSVGADDY LTKPFSPREL VARVQAMLRR PRPLGHMDAD AGEALSFGDL TIELAGRDVW LEDRAVPLTR TEFDLLATLA QRPGMAFSRR QLIDAVWGPA WVGDEHLVDV HVGHLRHKLG DSAAEGRYVR TVRGIGYRMG RGA
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