Gene Noca_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0312 
Symbol 
ID4597946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp332756 
End bp333457 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content73% 
IMG OID639774925 
Productresponse regulator receiver 
Protein accessionYP_921543 
Protein GI119714578 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0102436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGGTC GGCGCGCCCT GGTGGTCGAG GACGAGCCGG AGCTGGCACG GCTGGTCGGC 
AGCTACCTCG AGCGCGACGG GTTCGCGGTC ACGATCGTCC ACGACGGTCT CGAGGCGGTG
GCGCGCTCGC GCGAGGTCGA CCCGGACGTG GTGGTCCTCG ACCTGGGTCT GCCGGGCCTC
GACGGTGTGG AGGTGTGCCG CCGCCTGCGG ACGTTCTCCG ATGGGTACGT CGTGATGCTC
ACCGCCCGCA GCGACGAGGT CGACACGCTG ATCGGTCTGT CGGTCGGCGC CGACGACTAC
CTGACGAAGC CGTTCAGCCC GCGGGAGCTG GTCGCTCGCG TCCAGGCGAT GCTCCGGCGT
CCGCGGCCGC TCGGCCACAT GGATGCCGAC GCCGGGGAGG CCCTCTCGTT CGGGGACCTG
ACCATCGAGC TGGCCGGGCG CGACGTGTGG CTCGAGGACC GCGCGGTCCC GCTCACCCGC
ACCGAGTTCG ACCTGCTTGC GACCCTGGCC CAGCGGCCGG GCATGGCCTT CAGCCGTCGC
CAGCTGATCG ACGCGGTCTG GGGACCCGCT TGGGTCGGCG ACGAGCACCT CGTCGACGTC
CACGTCGGCC ACCTGCGGCA CAAGCTCGGC GACTCCGCGG CCGAGGGCAG GTACGTCCGG
ACGGTCCGGG GAATCGGCTA CCGGATGGGG CGGGGGGCAT GA
 
Protein sequence
MSGRRALVVE DEPELARLVG SYLERDGFAV TIVHDGLEAV ARSREVDPDV VVLDLGLPGL 
DGVEVCRRLR TFSDGYVVML TARSDEVDTL IGLSVGADDY LTKPFSPREL VARVQAMLRR
PRPLGHMDAD AGEALSFGDL TIELAGRDVW LEDRAVPLTR TEFDLLATLA QRPGMAFSRR
QLIDAVWGPA WVGDEHLVDV HVGHLRHKLG DSAAEGRYVR TVRGIGYRMG RGA