Gene Noca_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0308 
Symbol 
ID4596019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp327960 
End bp329408 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content77% 
IMG OID639774922 
Producthypothetical protein 
Protein accessionYP_921540 
Protein GI119714575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00549191 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCACCA AGAAGGATCT CGTCGAGGCG TACTCGTTCA GCCGGCGCCG GCTCGTCACG 
GCGTTCGTCT CCGGAGCGCC GGGCGGCCGC GAGGTCGAGC CGAGCCGCCC GGGGCGCACC
ATCATCGGCG GCCTGGCGCT CGCCGTGCTG CTGGCGGCCG GTGCCGCGAT CGCGGGCGTC
CTCTCCCCGC GGACGCCGGA CGACTGGGCC AGCAACGGGC TGATCGTCTC CAAGGAGACC
GGCCAGGCGT ACGTCGTCCT CCCGGCCGCG GACGGCTCGG CGCCCGAGCC GGACGCGCCG
GTCGAGCTGC GCCCGGTCAT CAACATCACC TCGGCCAGGC TGATCCTCGG GGCCGACGTC
GAGCCGATGC TGATCTCCCA GGACACCATC GACGACCAGC GGGTCGGTGA CGACATCGGC
ATCCTGGGCG CGCCCGCCAG CCTGCCCGCG CCCGGCCTGC TGGTGGAGAC GGGCTGGACC
GCCTGCACGG CCGACGACCG GGGGATGCGG GTCCGGGTGG CCGTCGACCC CGACGTGCTG
CCCGCGCCGG ACGCCGCCCA GGTCGTCGAG GTCGGCGGCT CCTTCTACCT GGTCGCCTCC
GCGCAGGTCG GCGGTGACGC GGCGGCGGCG TACGCGCTCC GGCTCCCGGG CGGGGACACC
GTCGACAACC TGCTCGGCGC CCTGGACCTG CCGGCGCGGG TGTTCGCGCC GACCGTGCCG
CGCGGGTGGC TCGACCTGTT CCCGGCGGGC GCCGCGCTCG GCTGGGAGAG TTTCGGGCTG
GCCGGCGTGG GCGGGCGACC GGACGGCTGG GACGCGGCCC AGGTGCCGGG CCGCGCCCGG
GTGGGCGACG TCCTCCGGGA CGCCACCGGC GACGCCGTGG TGCTGACCGC GGACGGGCCG
GCCGAGCTCG ACCCCTTCGC GCTCGCCGTC TACAGCAACA CCCCCATCCC CGGCGGTGGC
ACCCCGCGGG TGCTCCCGGT CGACCGGTTC CCCGACCTGG CCAGGACCCG CCTGCCCGGC
CCGGACCGGC ACTGGCCGAC CACGACGGTC GAGCCCACGG AGACCGACCC CTGCGCGGTG
CTGACCACGG CAGGCGAGGA GCCGGCGGTC GTGCAGCTCG CGCAGCGCCC GGGACCTGGC
TACGACGCAC GCGACGTCGT GCCCGGCCAC GCCGACGTGA CCGTCGACCC GGGCCGGGGC
GCCTACGTGC GGTCCGCGAG CCCGGAGGGC GCCCGCGCCC CGCAGCCCGT GGCGATCGAT
GCCAAGGGAC GGGCCAACCC GCTCGACGGC GACGAGACCG CAGGCCTGCT CGGCTACGCC
GACTTCCCCG CACCGGTGGT CCCGGACACC TGGGTGAAGC TGTTCGGCGC CGGCGTACCG
CTCTCGCAGA ACCTCGCGCT CTGCCCGCCC GCCGCGGCCG GCGCCCAGGA CGGCCCGTCG
TGCGCGTGA
 
Protein sequence
MATKKDLVEA YSFSRRRLVT AFVSGAPGGR EVEPSRPGRT IIGGLALAVL LAAGAAIAGV 
LSPRTPDDWA SNGLIVSKET GQAYVVLPAA DGSAPEPDAP VELRPVINIT SARLILGADV
EPMLISQDTI DDQRVGDDIG ILGAPASLPA PGLLVETGWT ACTADDRGMR VRVAVDPDVL
PAPDAAQVVE VGGSFYLVAS AQVGGDAAAA YALRLPGGDT VDNLLGALDL PARVFAPTVP
RGWLDLFPAG AALGWESFGL AGVGGRPDGW DAAQVPGRAR VGDVLRDATG DAVVLTADGP
AELDPFALAV YSNTPIPGGG TPRVLPVDRF PDLARTRLPG PDRHWPTTTV EPTETDPCAV
LTTAGEEPAV VQLAQRPGPG YDARDVVPGH ADVTVDPGRG AYVRSASPEG ARAPQPVAID
AKGRANPLDG DETAGLLGYA DFPAPVVPDT WVKLFGAGVP LSQNLALCPP AAAGAQDGPS
CA