Gene Noca_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0298 
Symbol 
ID4596009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp316905 
End bp318422 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content73% 
IMG OID639774912 
Productpotassium/proton antiporter 
Protein accessionYP_921530 
Protein GI119714565 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.12158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGTTCG ACGTCCACGA TCTCGACACG TTCATCCTCG TGGGCTCGGC GGTCACGCTC 
CTGGCGATCC TGGCCGTCCG GGTCTCCACC GGCGCCGGAC TGCCCAGCCT GCTGATCTAC
CTGCTCATGG GTGCCGCACT GGGCGAGTCG GGCGTCGGCA TCCAGTTCGA GAACTACGAG
GTCGCGCACG CGGTCGGCTT CGCCGCGCTG GCGATGATCC TCGCCGAGGG TGGCCTGACC
ACGAACTGGC CCGAGATGCG CGGCTGCATC CGGCTCGGCG TCTCGCTGGC GACGCTCGGC
GTCGCGGTGT CGGTCACCGT GGTCGCCGTC GGCGCGCACT ACCTGCTCGG CATGCCGTGG
CAGCTGGCGG TCCTGCTCGG GGCGGTCACG TCGCCGACCG ACGCGGCGGC GGTGTTCTCG
GTGCTCCGGG TGGTGCCGCT GCCCAAGCGG CTGACCGGGA CGCTCGAGGC CGAGTCGGGT
CTCAACGACG CACCCACCGT CGTCCTGGTC ACGCTGATCT CGAGCGGGGC GGTCGAGGAC
AACGGCGCGC TCGCCATGGT CGGCATCGTC GGCTACGAGC TCGCGATCGG GGTCGCGCTC
GGCCTGGCCG CCGGGTACGG CGGCGCCTGG GTGATGCGCC GGGCCGCGCT GCCCTCCTCC
GGCCTCTACC CGCTCGCGGT GATGACCCTC GCCTTCCTGG GGTACGGCGC CGCCGCGTTC
GTGCACGGGT CCGGCTTCGC CGCGGTGTAC GTCGCGGCCC TGGTCCTCGG CAACTCCGAG
CTCCCCCACC GGGCGGCGAC CCGGTCCTTC GCCGAGGGGC TGGCCTGGCT GTCCCAGATC
GGCCTGTTCG TCACCCTGGG CCTGCTGCTC TCGCCGGGGC GGATCAGCCT CTCGACCGTG
GGCCTGGCGA TCGTCGCCGG CCTGGTCCTC ACCTTCGTCG CGCGGCCGCT GTCGGTGCTG
GCCAGTGCGG TCGTGCAGCC ACTGCCGTGG CGCGAGCTCT CGTTCGTGTC CTGGGCCGGT
CTGCGCGGGG CGGTGCCGAT CGTGCTCACG ACGATCCCGC TCGCCGAGGG CGTCGACGAT
GCGGAGCGGC TCTTCGACCT GGTCTTCGTG ATGGTCGTGC TCTACACGGT GCTGACCGGG
CCGACGCTGC CACTCGTCGC CCGGGTCCTG CGGGTCGCCC GGCGCTCCGA GCCGCGCGGG
CTCGAGGTCG AGGCCGCGCC CCTGGAGCGG ATCGCGGCCG ACCTGCTGCA GGTCTCGATC
GCGCCCGGAT CGCGGATGCA CGGCGTCGAG GTCGGCGAGC TCCGGCTGCC GCGCGGTGCC
TCGGTGTCGA TGGTGATCCG GGACGGCAAC ACGCTGGTGC CCGAGCGGCG TACCGTCCTC
CGGCAGGGCG ACGACCTCCT GGTGGTGACT CCTCGCAAGC TGCGTTGGCA GACCGAGGAG
CGACTGCGCC AGGTCAGTGC GCGCGGCCGG CTCGCCCAGT GGCTGGTCGA GAAGCCCGCC
CGCCGGCCCC AGCCCTGA
 
Protein sequence
MSFDVHDLDT FILVGSAVTL LAILAVRVST GAGLPSLLIY LLMGAALGES GVGIQFENYE 
VAHAVGFAAL AMILAEGGLT TNWPEMRGCI RLGVSLATLG VAVSVTVVAV GAHYLLGMPW
QLAVLLGAVT SPTDAAAVFS VLRVVPLPKR LTGTLEAESG LNDAPTVVLV TLISSGAVED
NGALAMVGIV GYELAIGVAL GLAAGYGGAW VMRRAALPSS GLYPLAVMTL AFLGYGAAAF
VHGSGFAAVY VAALVLGNSE LPHRAATRSF AEGLAWLSQI GLFVTLGLLL SPGRISLSTV
GLAIVAGLVL TFVARPLSVL ASAVVQPLPW RELSFVSWAG LRGAVPIVLT TIPLAEGVDD
AERLFDLVFV MVVLYTVLTG PTLPLVARVL RVARRSEPRG LEVEAAPLER IAADLLQVSI
APGSRMHGVE VGELRLPRGA SVSMVIRDGN TLVPERRTVL RQGDDLLVVT PRKLRWQTEE
RLRQVSARGR LAQWLVEKPA RRPQP