Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0175 |
Symbol | |
ID | 4598951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 188777 |
End bp | 189625 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639774785 |
Product | HAD family hydrolase |
Protein accession | YP_921407 |
Protein GI | 119714442 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.646059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGAC CCGTGAGCGG CTGGCGGCCC CGGCTCGTCG CCCTCGACAT CGACGGCACG ATCCTGAAGT GGGTGGAGGG GTCGGGCACC ACCCGCGAGG AGATCTCACC CACGGTCAAG GAGTCGGTGC ACCGCGTCCT GGCCGCCGGT GCCCACGTGG TGCTGGCCAG CGGCCGGTCC CCGCACGGCA TGACCAACGT GGCGGACCTG CTCGAGCTGC ACGGTCCGGG CCGCGACCGG CTCTGGATCG TGGCGTCCAA CGGTGCCGTG GTGTTCCGCT ACCCGCCGCT CGACGTGGTC CACGAGGAGA CCTTCGACGC GCGGCCGGCC GTGGAGGCGA TCCTCGACCG GCACCCGACC GCGCTCGTGG CGGTCGAGGA GCGCGGCGTC GGCTACCGGG TCAACTCGCA CTTCCCGGAC GGCGAGCTGT CCGGCGACAT GATCGTCACC GAGATCGACG AGCTGCTCGC GGTCGAGGTC AGCCGGGTGA TCATCCGCGA CCCGGAGTCC ACCGCCGACG AGTTCGTCGC GCTCGCCGAG GAGCTGGGGC TGCAGGGCAC CAACTACGTC GTCGGCTGGA CCGCCTGGCT CGACCTCGCC CCCGTCGGCG TCTCGAAGGC CTCCGGGCTC GAGTACGTCG CCAAGCAGCT CGGCATCTCC TCCGACGACA CCCTTGCGCT CGGCGACGGC CGCAACGACG TCGAGATGTT CGAGTGGGCG CACCGCGGGG TCGCGATGGG CCAGGCGATC GAGGAGGTCC TGGCGAAGGC CGACGCCGTC ACCGGCAGCG TCTACGAGGA CGGCGTGGCG ACCGAGCTGG ACCGGTGGTT CGGGGACGGG CGCGCCTGA
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Protein sequence | MSGPVSGWRP RLVALDIDGT ILKWVEGSGT TREEISPTVK ESVHRVLAAG AHVVLASGRS PHGMTNVADL LELHGPGRDR LWIVASNGAV VFRYPPLDVV HEETFDARPA VEAILDRHPT ALVAVEERGV GYRVNSHFPD GELSGDMIVT EIDELLAVEV SRVIIRDPES TADEFVALAE ELGLQGTNYV VGWTAWLDLA PVGVSKASGL EYVAKQLGIS SDDTLALGDG RNDVEMFEWA HRGVAMGQAI EEVLAKADAV TGSVYEDGVA TELDRWFGDG RA
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