Gene Noca_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0175 
Symbol 
ID4598951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp188777 
End bp189625 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content72% 
IMG OID639774785 
ProductHAD family hydrolase 
Protein accessionYP_921407 
Protein GI119714442 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.646059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGAC CCGTGAGCGG CTGGCGGCCC CGGCTCGTCG CCCTCGACAT CGACGGCACG 
ATCCTGAAGT GGGTGGAGGG GTCGGGCACC ACCCGCGAGG AGATCTCACC CACGGTCAAG
GAGTCGGTGC ACCGCGTCCT GGCCGCCGGT GCCCACGTGG TGCTGGCCAG CGGCCGGTCC
CCGCACGGCA TGACCAACGT GGCGGACCTG CTCGAGCTGC ACGGTCCGGG CCGCGACCGG
CTCTGGATCG TGGCGTCCAA CGGTGCCGTG GTGTTCCGCT ACCCGCCGCT CGACGTGGTC
CACGAGGAGA CCTTCGACGC GCGGCCGGCC GTGGAGGCGA TCCTCGACCG GCACCCGACC
GCGCTCGTGG CGGTCGAGGA GCGCGGCGTC GGCTACCGGG TCAACTCGCA CTTCCCGGAC
GGCGAGCTGT CCGGCGACAT GATCGTCACC GAGATCGACG AGCTGCTCGC GGTCGAGGTC
AGCCGGGTGA TCATCCGCGA CCCGGAGTCC ACCGCCGACG AGTTCGTCGC GCTCGCCGAG
GAGCTGGGGC TGCAGGGCAC CAACTACGTC GTCGGCTGGA CCGCCTGGCT CGACCTCGCC
CCCGTCGGCG TCTCGAAGGC CTCCGGGCTC GAGTACGTCG CCAAGCAGCT CGGCATCTCC
TCCGACGACA CCCTTGCGCT CGGCGACGGC CGCAACGACG TCGAGATGTT CGAGTGGGCG
CACCGCGGGG TCGCGATGGG CCAGGCGATC GAGGAGGTCC TGGCGAAGGC CGACGCCGTC
ACCGGCAGCG TCTACGAGGA CGGCGTGGCG ACCGAGCTGG ACCGGTGGTT CGGGGACGGG
CGCGCCTGA
 
Protein sequence
MSGPVSGWRP RLVALDIDGT ILKWVEGSGT TREEISPTVK ESVHRVLAAG AHVVLASGRS 
PHGMTNVADL LELHGPGRDR LWIVASNGAV VFRYPPLDVV HEETFDARPA VEAILDRHPT
ALVAVEERGV GYRVNSHFPD GELSGDMIVT EIDELLAVEV SRVIIRDPES TADEFVALAE
ELGLQGTNYV VGWTAWLDLA PVGVSKASGL EYVAKQLGIS SDDTLALGDG RNDVEMFEWA
HRGVAMGQAI EEVLAKADAV TGSVYEDGVA TELDRWFGDG RA