| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0174 |
|---|
| Symbol | |
|---|
| ID | 4598950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 187506 |
|---|
| End bp | 188780 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639774784 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_921406 |
|---|
| Protein GI | 119714441 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC CCCGTGTCCT CCGGGACGAG CCCGACCGCG TGCGCGCCGC CCAGGTCAAG
CGCGGTCTGT CCGACGAGGT CGTGGACCAC GCGCTGTCCG CGGACGGCGA GCGTCGCCGG
GCGATCGCCG CGTTCGAGGC CAAGCGGGCC GAGCAGAAGC AGCTCGGCAA GCTGATCCCG
CAGGCCCAGG GTGAGGAGAA GCAGGCGCTG CTGGCGCAGA CCAAGACCCT CGCTGCCGAG
GTCAAGCAGG CCGAGGCGGC CCAGGCCGTG GCCGAGGAGG CCTGGCAGGC GGCCCTGATG
AGCATCCCGA ACCTCGCGGC CGACGAGGCG CCCGCCGGCG GCGAGGACGA CTACGTCGTG
CTCGAGGAGA TCGGCACCCC CCGCGACTTC GCGGCCGACG GCTTCGAGCC GCGCGACCAC
ATCGAGCTGG GCCGGATGCT CGGCGCGATC GACCTCGACC GGGGCGCCAA GGTGTCCGGG
TCGCGGTTCT ACTTCCTCAC CGGCGCCGGG GCCGAGCTCG AGCTGGCGCT GGTCAACCTG
GCCATGCAGC AGGCCCGCGA GTCCGGCTTC ACCCCGGTCA TCGCCCCCTC GATGGTCAAG
CCGCGCGCGA TGGACGGCAC CGGGTTCCTC GGCCAGGCGG CCGACGACGT CTACCGGATC
GAGGGCCAGG ACATGTACCT CGTCGGGACG TCCGAGGTCC CGATGGCGGC GTACCACTCC
GACGAGATCC TCGACGGCGG CGCGCTGCCG CTGCGCTACG CCGCGTTCAG CCCGTGCTTC
CGCAAGGAGG CCGGCTCGCA CGGCAAGGAC ACCAAGGGCA TCATCCGGGT GCACTGGTTC
GACAAGGTCG AGATGTTCGT CTACACCACG ACCGAGGAGT CGTACGCCGA GCACCAGCGG
CTGCTGGCGT GGGAGAAGGA GTTCCTCGAG AAGCTCGAGC TCGCCTACCG GGTGATCGAC
GTCGCCGCCG GTGACTTGGG CCTGTCCGCG CAGCGGAAGT TCGACTGCGA GGCCTGGATC
CCCACCCAGG GCCGCTACCG CGAGCTCACC TCGACGTCGA ACTGCACCGA GTTCCAGACC
CGCCGCCTCG ACACCCGCGG CCGGTTCGGG TCGGAGATCA GGCCGATCTC GACCCTCAAC
GGCACCCTGT GCGCGATCAC CCGCACGATC GTGGCGGTGC TCGAGACCCA CCAGCAGGCC
GACGGCTCGG TCCGGGTGCC GAAGGCGCTC CAGCCCTGGC TGGGCCGCGA GGTCCTGGAG
CCGGTCACCA CGTGA
|
|---|
| Protein sequence | MIDPRVLRDE PDRVRAAQVK RGLSDEVVDH ALSADGERRR AIAAFEAKRA EQKQLGKLIP
QAQGEEKQAL LAQTKTLAAE VKQAEAAQAV AEEAWQAALM SIPNLAADEA PAGGEDDYVV
LEEIGTPRDF AADGFEPRDH IELGRMLGAI DLDRGAKVSG SRFYFLTGAG AELELALVNL
AMQQARESGF TPVIAPSMVK PRAMDGTGFL GQAADDVYRI EGQDMYLVGT SEVPMAAYHS
DEILDGGALP LRYAAFSPCF RKEAGSHGKD TKGIIRVHWF DKVEMFVYTT TEESYAEHQR
LLAWEKEFLE KLELAYRVID VAAGDLGLSA QRKFDCEAWI PTQGRYRELT STSNCTEFQT
RRLDTRGRFG SEIRPISTLN GTLCAITRTI VAVLETHQQA DGSVRVPKAL QPWLGREVLE
PVTT
|
|---|
| |