Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0136 |
Symbol | |
ID | 4597585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 150060 |
End bp | 151574 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639774746 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_921368 |
Protein GI | 119714403 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.903569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGAGA CCCAGGACGA GCGCACCGCC CCGGCCCCAG GCCGCCCCGT CGACGCCCCC GACGCACCTC CGGAGGGACT CGACCGCCGG GTGCTGATGG TCGCCGGGGT GGTCGTGCTC GGCGCGATCA TGTCGATCCT CGACATCACG GTGGTCTCGG TCGCACTGCA GACCTTCCAG CAGGAGTTCG ACGCGACCTC GGCCGAGGTC GCGTGGACGA TGACCGGCTA CACCCTCGCC CTGGCCAGCG TGATCCCGCT GACCGGCTGG GCGGCCGACC GGTTCGGCAC CAAGCGCCTC TACCTGCTCG CCGTCTTGCT GTTCACCGCC GGATCCGTGC TGTGCGCGGC GGCCACGTCG CTCGAGATGC TGGTGAGCTT CCGGGTCCTG CAGGGCGTCG GCGGCGGCAT GCTGATGCCG CTGGGCATGA CGATCCTGAC TCGGGCCGCC GGCCCGGAGC GGGTCGGCCG GGTGATGGCG GTGCTCGGCA TCCCGATGCT GCTCGGCCCG ATCTTCGGCC CGATCCTCGG CGGCGCCCTG ATCGACTCCG CGAGCTGGCA CTGGATCTTC CTGATCAACC TGCCCATCGG GATCGCCGCC CTCGCCTACG CCGCCGTCGT GCTGCCGCGC GACCACGTCG AGCCGTCCGA GACCTTCGAC TGGCTCGGCA TGGTCCTGCT CTCCCCCGGG CTCGCCGCGT TCCTGTACGG CGTCTCCTCG ATCCCGGCAG CACGTGAGGA GCACGGCACC CTCTGGACGA CCGAGGTGGT CGCGCCCGCG CTCGCCGGCC TGCTGCTGAT CGCGGCCTTC GTGCCGTGGG CCCTCAACCG CCGCAACCTC CACCCGCTGG TCGACCTGCG GCTGTTCGGC AACGGCACGA TGACGGCCGC GGTGCTGTCG ATGTCGCTGT TCGCGATCGC GTTCTTCGGC GCCAGCCTGC TGTTCCCGCT GTACTTCCAG TGGGTGCGCG GCGAGGACGC GCTCGGCGCC GGCCTGCTGC TGGCACCGCA GGGCGTCGGC GCGATGATCA CGATGCCGAT CGCGGGTGTG CTCGCCGACC GCATCGGCCC CGGCAAGATC GTGCTGACCG GCATCGCCGT GATCACGGTC GGCATGGGCA TGTTCACCCA GCTCGACCAG GACACCTCCT ATGCCTACCT GCTCACCGCA CTGTTCGTGA TGGGCCTCGG CATGGGCGCC ACGATGATGC CGATCATGTC CGCCGCGCTC GCGACGCTGC GCGAGCACAC GATCGCCCGC GGCTCGACGC TGATGAACAT CGTCCAGCAG GTCGCCGCCT CGATCGGTAC GGCGGTGTTC GCGATGCTGC TCACCAACGG CACCATCGAT CTCGACCCGA GCGACCCCGC CGGGTTCGTC ACCGGCCTCG CCGACGCGTT CGCCCACGTG TTCGTGGTCG CCACGGTCAT GGTCGCGCTG GTCCTGGTCC CGGCGTTCTT CCTGCCCCGC CGCAAGGTCG CCCCGGCCGA CCCCACCTTG GTGGTCGGCC ACTAG
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Protein sequence | MTETQDERTA PAPGRPVDAP DAPPEGLDRR VLMVAGVVVL GAIMSILDIT VVSVALQTFQ QEFDATSAEV AWTMTGYTLA LASVIPLTGW AADRFGTKRL YLLAVLLFTA GSVLCAAATS LEMLVSFRVL QGVGGGMLMP LGMTILTRAA GPERVGRVMA VLGIPMLLGP IFGPILGGAL IDSASWHWIF LINLPIGIAA LAYAAVVLPR DHVEPSETFD WLGMVLLSPG LAAFLYGVSS IPAAREEHGT LWTTEVVAPA LAGLLLIAAF VPWALNRRNL HPLVDLRLFG NGTMTAAVLS MSLFAIAFFG ASLLFPLYFQ WVRGEDALGA GLLLAPQGVG AMITMPIAGV LADRIGPGKI VLTGIAVITV GMGMFTQLDQ DTSYAYLLTA LFVMGLGMGA TMMPIMSAAL ATLREHTIAR GSTLMNIVQQ VAASIGTAVF AMLLTNGTID LDPSDPAGFV TGLADAFAHV FVVATVMVAL VLVPAFFLPR RKVAPADPTL VVGH
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