Gene Noca_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0136 
Symbol 
ID4597585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp150060 
End bp151574 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content71% 
IMG OID639774746 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_921368 
Protein GI119714403 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.903569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGAGA CCCAGGACGA GCGCACCGCC CCGGCCCCAG GCCGCCCCGT CGACGCCCCC 
GACGCACCTC CGGAGGGACT CGACCGCCGG GTGCTGATGG TCGCCGGGGT GGTCGTGCTC
GGCGCGATCA TGTCGATCCT CGACATCACG GTGGTCTCGG TCGCACTGCA GACCTTCCAG
CAGGAGTTCG ACGCGACCTC GGCCGAGGTC GCGTGGACGA TGACCGGCTA CACCCTCGCC
CTGGCCAGCG TGATCCCGCT GACCGGCTGG GCGGCCGACC GGTTCGGCAC CAAGCGCCTC
TACCTGCTCG CCGTCTTGCT GTTCACCGCC GGATCCGTGC TGTGCGCGGC GGCCACGTCG
CTCGAGATGC TGGTGAGCTT CCGGGTCCTG CAGGGCGTCG GCGGCGGCAT GCTGATGCCG
CTGGGCATGA CGATCCTGAC TCGGGCCGCC GGCCCGGAGC GGGTCGGCCG GGTGATGGCG
GTGCTCGGCA TCCCGATGCT GCTCGGCCCG ATCTTCGGCC CGATCCTCGG CGGCGCCCTG
ATCGACTCCG CGAGCTGGCA CTGGATCTTC CTGATCAACC TGCCCATCGG GATCGCCGCC
CTCGCCTACG CCGCCGTCGT GCTGCCGCGC GACCACGTCG AGCCGTCCGA GACCTTCGAC
TGGCTCGGCA TGGTCCTGCT CTCCCCCGGG CTCGCCGCGT TCCTGTACGG CGTCTCCTCG
ATCCCGGCAG CACGTGAGGA GCACGGCACC CTCTGGACGA CCGAGGTGGT CGCGCCCGCG
CTCGCCGGCC TGCTGCTGAT CGCGGCCTTC GTGCCGTGGG CCCTCAACCG CCGCAACCTC
CACCCGCTGG TCGACCTGCG GCTGTTCGGC AACGGCACGA TGACGGCCGC GGTGCTGTCG
ATGTCGCTGT TCGCGATCGC GTTCTTCGGC GCCAGCCTGC TGTTCCCGCT GTACTTCCAG
TGGGTGCGCG GCGAGGACGC GCTCGGCGCC GGCCTGCTGC TGGCACCGCA GGGCGTCGGC
GCGATGATCA CGATGCCGAT CGCGGGTGTG CTCGCCGACC GCATCGGCCC CGGCAAGATC
GTGCTGACCG GCATCGCCGT GATCACGGTC GGCATGGGCA TGTTCACCCA GCTCGACCAG
GACACCTCCT ATGCCTACCT GCTCACCGCA CTGTTCGTGA TGGGCCTCGG CATGGGCGCC
ACGATGATGC CGATCATGTC CGCCGCGCTC GCGACGCTGC GCGAGCACAC GATCGCCCGC
GGCTCGACGC TGATGAACAT CGTCCAGCAG GTCGCCGCCT CGATCGGTAC GGCGGTGTTC
GCGATGCTGC TCACCAACGG CACCATCGAT CTCGACCCGA GCGACCCCGC CGGGTTCGTC
ACCGGCCTCG CCGACGCGTT CGCCCACGTG TTCGTGGTCG CCACGGTCAT GGTCGCGCTG
GTCCTGGTCC CGGCGTTCTT CCTGCCCCGC CGCAAGGTCG CCCCGGCCGA CCCCACCTTG
GTGGTCGGCC ACTAG
 
Protein sequence
MTETQDERTA PAPGRPVDAP DAPPEGLDRR VLMVAGVVVL GAIMSILDIT VVSVALQTFQ 
QEFDATSAEV AWTMTGYTLA LASVIPLTGW AADRFGTKRL YLLAVLLFTA GSVLCAAATS
LEMLVSFRVL QGVGGGMLMP LGMTILTRAA GPERVGRVMA VLGIPMLLGP IFGPILGGAL
IDSASWHWIF LINLPIGIAA LAYAAVVLPR DHVEPSETFD WLGMVLLSPG LAAFLYGVSS
IPAAREEHGT LWTTEVVAPA LAGLLLIAAF VPWALNRRNL HPLVDLRLFG NGTMTAAVLS
MSLFAIAFFG ASLLFPLYFQ WVRGEDALGA GLLLAPQGVG AMITMPIAGV LADRIGPGKI
VLTGIAVITV GMGMFTQLDQ DTSYAYLLTA LFVMGLGMGA TMMPIMSAAL ATLREHTIAR
GSTLMNIVQQ VAASIGTAVF AMLLTNGTID LDPSDPAGFV TGLADAFAHV FVVATVMVAL
VLVPAFFLPR RKVAPADPTL VVGH