Gene Noca_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0079 
Symbol 
ID4600052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp88141 
End bp90204 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content69% 
IMG OID639774690 
Product5-oxoprolinase (ATP-hydrolyzing) 
Protein accessionYP_921312 
Protein GI119714347 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[E] Amino acid transport and metabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGGAT CGTCGTCTTC ATCGGTCCGA GTCGCCGTCG ATGTCGGGGG CACGTTCACC 
GATGTTGTGA CGCTCGACTC GGCCGACGGG GCGCTCCGGT TCGACAAGGT GCCGACGACG
CCTGCCGACG CCAGCCAGGG CGTGATCAAC GCGTTCGTCC GGTCGGGCGT GGACATGCAG
CGCGCTGGCT ACTTCACTCA CGGTACGACC CTCGGTCTGA ACGCCCTCTT GACGCGGAAC
GGCGCGCGGA CGGCGATCGT CACGACCGAC GGCTTCCGTG ACGTGTATCT CCTGGGTCGC
ACCGATCGGC CCGTCTCCTA CGACTTCCGG TACAAGAAGC CCGAGAGCCT CGTCCGTCGG
GACGCGATCT TCGAGGTCCC GGAGCGGATG AACTACCAGG GCCGGGTCCT CCGCCCGTTC
GACGACGTCG CCGCGCGAGC CGTCGCCGAA CGGCTCAAGG ACGCCGGGTA CGAGTCGGTG
GCCGTGTGCT TCCTGCACGC GTACACCAAC CCCGACCACG AGCTGCGGAT GCGCGAGATC
CTCGCCGACG TAGCGCCGGA GATGGACGTC ACGCTGTCCC ACGAGCTGTC GCGCGAGTAC
CGGGAGTACG AGCGGACCAG CACGGCGGTC TTCGACGGCT ACATCAAGCC GGTGGTGCGG
CGCTACCTCG GCCGGCTCAA GAACGCGCTG GCCGAGAACG GCTTCGGGGG CCACTTCTTC
ATGATCCGCT CGGGGGGCGG CGCGATGACG GTCGAGAGCG CCCGCGAGGC GCCGGTGAAC
CTGATCCTCT CCGGCCCGGC CGGTGGGGTG ATCGGGGCGA CGTCGTTCGC GCGGACGACC
GGTGAGGGCA ACCTCATCAC CATCGACATG GGCGGTACGA GCCTGGACGC CTCGCTCATC
GTCGACGGCG AGTCCGTCCT GCGGCACGAG GCCATGTTCG AGGGCCTTCC GCTGGCCATC
CCGTCGCTGT ACATCCACAC GATCGGCGCC GGCGGTGGCT CGTTGGTCTG GATCGACGAG
GGCGGCCACC TCCAGGTCGG TCCGCAGAGC GCCGGGTCGT CGCCGGGTCC CGCGGCGTAC
AACTGGGGTG GCACGCAGGC CACGTTCACC GACGCGGCGC TGGTGGTGGG CTATCTCGGG
ACCGAGACCG CGCTCGCCGG CAGTCTCGAG TTGAGGCGGG ACCTCGCCGA GGATGCACTC
GTGCCGAACG CTGAGGCGTT GGGCATGTCC GTCGAGACCG TCGCCCGCGG CGTGCTGCGC
ATCGCGACCA CCAAGATCGT CGGAGCGGTT CGCTCGATCA CCGTTGACAT CGGGTACAAG
CCCAACGACT TCGCCCTGCT GACCTACGGC GGTGGCGGAG GTCTGGTCGC GGTCGATGTC
GCGCACGAGC TCTCCATCCC GCGCGTCATC GTCCCGCCGG GCCCGGGAGC GTTCTCGGCG
CTCGGCATGC TGATGGCCGA CGTCCAGCAC GACTACTCCA GGACCCAGGT GGCTCCGTTG
GACGGCATCG ATCTCCAGCA CTTGGAGTCG ACGTTCGGCG AGATGGAGGG CGAAGGCGGT
GCCGCGCTGC AGGACGAGGG CTTCGCGCCC GAGGATCGCA GGTTCCAGCG GTTCATCGAC
GTCCGCTACC TCGGCCAGGA GCACGCCGTC TCGGTGCCGG TCGAGCGGCT GTCGGCGGAC
GAGGACATCG AGCGTCTGCG TCACGAGTTC AGCGAGATTC ACGAGCGGCA CTACGGCCAC
GCGATGTCGG ATCCGATCGA GATCGTCACG CTGCGCTCCC GTGCCGTCGG GGTCGTGGAG
AGGCCCCGCC TGCCGGAGGT GCCCGAGCGG GAGGGCGACG TCCTGACGCC GATCGCCAGC
AGGGGGGTCG TGCAGCCGGA CGGCTCCCGT ACCCCGTACC AGGTCTACGA CCGGAGCCAC
TTCCGGTTCG GTGACCGCAT CGAAGGTCCG GCGATCATCG TCGAGCACAC CTCGACGACG
GTCATGCACA CCGGCGACAC GGCCGAGGTC GGCCGTGTCG GAGAGATCGT CATCACGCTT
GCAGAGGAGA CGAACCGTGG TTGA
 
Protein sequence
MPGSSSSSVR VAVDVGGTFT DVVTLDSADG ALRFDKVPTT PADASQGVIN AFVRSGVDMQ 
RAGYFTHGTT LGLNALLTRN GARTAIVTTD GFRDVYLLGR TDRPVSYDFR YKKPESLVRR
DAIFEVPERM NYQGRVLRPF DDVAARAVAE RLKDAGYESV AVCFLHAYTN PDHELRMREI
LADVAPEMDV TLSHELSREY REYERTSTAV FDGYIKPVVR RYLGRLKNAL AENGFGGHFF
MIRSGGGAMT VESAREAPVN LILSGPAGGV IGATSFARTT GEGNLITIDM GGTSLDASLI
VDGESVLRHE AMFEGLPLAI PSLYIHTIGA GGGSLVWIDE GGHLQVGPQS AGSSPGPAAY
NWGGTQATFT DAALVVGYLG TETALAGSLE LRRDLAEDAL VPNAEALGMS VETVARGVLR
IATTKIVGAV RSITVDIGYK PNDFALLTYG GGGGLVAVDV AHELSIPRVI VPPGPGAFSA
LGMLMADVQH DYSRTQVAPL DGIDLQHLES TFGEMEGEGG AALQDEGFAP EDRRFQRFID
VRYLGQEHAV SVPVERLSAD EDIERLRHEF SEIHERHYGH AMSDPIEIVT LRSRAVGVVE
RPRLPEVPER EGDVLTPIAS RGVVQPDGSR TPYQVYDRSH FRFGDRIEGP AIIVEHTSTT
VMHTGDTAEV GRVGEIVITL AEETNRG