Gene Noca_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0071 
Symbol 
ID4600122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp80377 
End bp80844 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content62% 
IMG OID639774682 
ProductAsnC family transcriptional regulator 
Protein accessionYP_921304 
Protein GI119714339 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCGC TTGATCGCGC AATAATCGAC CATCTGCGCC GCAACGCTCA TCTAACAAAC 
ACCGAGCTGG CTGAACTGGT CGGCTTGACG CCATCACCCT GCCTGCGCCG CGTGCGTCGA
CTCGAGAACG AGGGCATCAT CCTCGGCTAC CACGCCCACA TCGCTCCGGT AGCGCTTCAC
CGCGGGTTTG AGGTGCATGT CGACCTCGAG TTAGCCGACC AGACGAAGCA AACAATCCGC
GTCTTCGAGG CCGCTCTGAT CGCCTACGAC GAGGTCGTGG AAGCGCGCCG GATGTTCGGC
GCACCGGACT ACCAAGCCCT GGTCGCTGTG ACCGACCTGC CTGCCTACGA GCACTTCTTG
ACAGAGCACC TCACGGCCCT GCCGGGCCTG GGCAGACTCC AGTCCCGCTT CCCCATGAAG
ACCATCAAGA CCGACACACC AAGCACGCCG CCCACCACAC GCCATTGA
 
Protein sequence
MDSLDRAIID HLRRNAHLTN TELAELVGLT PSPCLRRVRR LENEGIILGY HAHIAPVALH 
RGFEVHVDLE LADQTKQTIR VFEAALIAYD EVVEARRMFG APDYQALVAV TDLPAYEHFL
TEHLTALPGL GRLQSRFPMK TIKTDTPSTP PTTRH