Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0070 |
Symbol | |
ID | 4600121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 79607 |
End bp | 80230 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639774681 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_921303 |
Protein GI | 119714338 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACGT CGGCGCTGGT CGCGTTTACG GTCGTCGCGG CTGCCATGGT GGTGCTGCCG GGACCGGACT GGGCGCTCGT TCTGGCAGCC GGGTCGCGTC GGAGCGGGGC GGTGATGGTC CCCACCATCT TTGGACTTGC CCTGGGGTAC GCGTTGCTCA CCGGCGTGGT GGCCACCGGT CTAGGACCCC TGATCGCTGC GGCGCCGGTG GCCTTGGTGG TGTTGACCGT GGTGGGTGCC GCCTATCTGA TCTACCTCGG GGTCGGCATC CTCTGCGGCC CTGCGACGGG GGTGCCGGAG GCCCGTGCGG TGGCGCCGGT GAGCCGGCTG GGCTCTGTAT TGCGCGGGGT GGGGGTCAGC GCTTTGAACC CCAAGGCTCT GTTGTTCTTC TTGGCCTTTC TTCCGCAGTT CGCGCGTCCG GCGGCGCCCT GGCCCCTGGC CGGGCAACTG TTCGTGCTCG GCGGCGTCTG GGTCGTTCTG ATCGTGGCGT TCTACACGGT CCTGGGCCAC GCCGCCCGCA CGCTTTCGGG CAGCCCCGGC CGCGCGAGGG CCGTGACCTG GCTGGCGGGC GCCGTGATGA TCCTCGTCGG CCTGGGCCTG CTGGTCGAAC AGCTCGCGTG GTGA
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Protein sequence | MDTSALVAFT VVAAAMVVLP GPDWALVLAA GSRRSGAVMV PTIFGLALGY ALLTGVVATG LGPLIAAAPV ALVVLTVVGA AYLIYLGVGI LCGPATGVPE ARAVAPVSRL GSVLRGVGVS ALNPKALLFF LAFLPQFARP AAPWPLAGQL FVLGGVWVVL IVAFYTVLGH AARTLSGSPG RARAVTWLAG AVMILVGLGL LVEQLAW
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