Gene Noca_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0070 
Symbol 
ID4600121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp79607 
End bp80230 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID639774681 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_921303 
Protein GI119714338 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACGT CGGCGCTGGT CGCGTTTACG GTCGTCGCGG CTGCCATGGT GGTGCTGCCG 
GGACCGGACT GGGCGCTCGT TCTGGCAGCC GGGTCGCGTC GGAGCGGGGC GGTGATGGTC
CCCACCATCT TTGGACTTGC CCTGGGGTAC GCGTTGCTCA CCGGCGTGGT GGCCACCGGT
CTAGGACCCC TGATCGCTGC GGCGCCGGTG GCCTTGGTGG TGTTGACCGT GGTGGGTGCC
GCCTATCTGA TCTACCTCGG GGTCGGCATC CTCTGCGGCC CTGCGACGGG GGTGCCGGAG
GCCCGTGCGG TGGCGCCGGT GAGCCGGCTG GGCTCTGTAT TGCGCGGGGT GGGGGTCAGC
GCTTTGAACC CCAAGGCTCT GTTGTTCTTC TTGGCCTTTC TTCCGCAGTT CGCGCGTCCG
GCGGCGCCCT GGCCCCTGGC CGGGCAACTG TTCGTGCTCG GCGGCGTCTG GGTCGTTCTG
ATCGTGGCGT TCTACACGGT CCTGGGCCAC GCCGCCCGCA CGCTTTCGGG CAGCCCCGGC
CGCGCGAGGG CCGTGACCTG GCTGGCGGGC GCCGTGATGA TCCTCGTCGG CCTGGGCCTG
CTGGTCGAAC AGCTCGCGTG GTGA
 
Protein sequence
MDTSALVAFT VVAAAMVVLP GPDWALVLAA GSRRSGAVMV PTIFGLALGY ALLTGVVATG 
LGPLIAAAPV ALVVLTVVGA AYLIYLGVGI LCGPATGVPE ARAVAPVSRL GSVLRGVGVS
ALNPKALLFF LAFLPQFARP AAPWPLAGQL FVLGGVWVVL IVAFYTVLGH AARTLSGSPG
RARAVTWLAG AVMILVGLGL LVEQLAW