Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0060 |
Symbol | |
ID | 4600111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 68116 |
End bp | 68985 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639774674 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_921296 |
Protein GI | 119714331 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTGGA TCAGCTCCCG CTGGAAGATC GCGTTGATGC TCGCGCCGGC GCTCATCCTC TTCACCGCGT TCTTCGTCTA CCCCGTGGGC TACGCGATCG CCTACAGCTT CACTGACTCG GCCGGCTTCG GAGCCGCGAA GTTCGTCGGT CTCGACAACT ACCTGGCGCT GAAGGACGAC CCGTTCTTCT GGCAGTCCAT GCGGAACACC ATCGCCATCC TCGTGGTCAG CGTCGCGCTC CTCATCCCGG CATCCTTCGG ACTCGCACTC CTCCTCCGCC GGCGCATCAG AGGTGGCGGT GCGTTGCGCG CCCTGGTATT CGGGCCAGCG ATCATCGCGC CGATCCTGGT CGGCCTGATC TGGGTCTTCA TCCTCGACCC GAAGATCGGG CTGCTCAACC GTGCTCTCGA GCCGCTGGGC GTCGAGCCCA TTCAGTGGAT CGGCGGGAAC ACCCTGACCC CCTACGCGAT CTCCTTGGTC TTCATCTGGA GCAGCGTCGG CTTCGCGATG ACGATCTTCT ACGCCGGGCT GCAACTATTG CCCGGGGATG TCATGGAGGC TGCCCAGCTC GATGGGGCGG GCTCCTGGCA GCAGCTGCGG TTCGTGACGA TCCCGATGAT GAGAGAGACC TTCGCCATCG TGGCCATCTT GTTGATCACG AACGTCTTCA AGATCTTTGA GCTGGTCTAC ATGCTCACCG GCGGCGGTCC GGTGCACCGG TCGGAGACGC TGGTGAGCTA CATGTACTTC GTCACCTTTA CCAACCAGCG CTACGGATCC GGGATGGCGA TCGCCGTCGT GATCTTCGTG CTTGGGGCGC TCACGTCCCT GGCCTACCTC GCGGCCGCGC GGCGACGGAG CCTCGCATGA
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Protein sequence | MIWISSRWKI ALMLAPALIL FTAFFVYPVG YAIAYSFTDS AGFGAAKFVG LDNYLALKDD PFFWQSMRNT IAILVVSVAL LIPASFGLAL LLRRRIRGGG ALRALVFGPA IIAPILVGLI WVFILDPKIG LLNRALEPLG VEPIQWIGGN TLTPYAISLV FIWSSVGFAM TIFYAGLQLL PGDVMEAAQL DGAGSWQQLR FVTIPMMRET FAIVAILLIT NVFKIFELVY MLTGGGPVHR SETLVSYMYF VTFTNQRYGS GMAIAVVIFV LGALTSLAYL AAARRRSLA
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