Gene Noca_0053 details

Gene Information

• Locus tag: Noca_0053
• ID: 4600104
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 60327
• End bp: 60929
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639774667
• Product: hypothetical protein
• Protein accession: YP_921289
• Protein GI: 119714324

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTGCGGTT CGTCGAATGG CCTGCCCTTT CTCCGCGATG ATGTTTGCGT GTCGGAGCTA 
TTGACCCAGC TGTGGGCGAG AGTGCGCGCC CAACTCGAGA GTGCGCGCAG CCAGCTGACG 
AATCCGGATG ACGAGGCACT CTTCCTCTAC GAAGACCTCC TCAGCCACAA CGAGCTCGGG 
CTCGCTCTTG ACGCGCTCGC AGATGTCGCG TTCGAGCAGC GCGCCCCTGG CGAGGTCTGG 
CAGATGCTCG GCGGCGCAAT CGAAGCAATG CAGTTGGAGC CGGATGACAG CGTTCACGGC 
GGCGCCGTCC AGAAGGTCCT GGAGCAGCTG GCTGCGGCGC ACGACTGGCG CGGGCTGCAG 
CGGCTTCTGA ATGAGTGGGA CCCCATTGGC GTCCGTCCCG ACCTTGGCGG GCCAGATGAC 
GAGTACTCCT GCCTCTACGT TCCACTTGTG GACCGCCTGC ACGCCGAGGC ACCCGTAGCG 
GAGATCGCAG AGTTCCTGCG TGCTGAACCG AGCGACCACT TCGGCCTCGA TCCCGCCTAC 
TCCCGGCCCG AGGTGTTCGC CGGTCGGCTG GTTGAGTGGT ACGCCTCTGG CGCCCCCGCC 
TGA 

 

Protein sequence

MCGSSNGLPF LRDDVCVSEL LTQLWARVRA QLESARSQLT NPDDEALFLY EDLLSHNELG 
LALDALADVA FEQRAPGEVW QMLGGAIEAM QLEPDDSVHG GAVQKVLEQL AAAHDWRGLQ 
RLLNEWDPIG VRPDLGGPDD EYSCLYVPLV DRLHAEAPVA EIAEFLRAEP SDHFGLDPAY 
SRPEVFAGRL VEWYASGAPA