| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0036 |
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| Symbol | |
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| ID | 4598390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 39830 |
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| End bp | 41461 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639774651 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_921273 |
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| Protein GI | 119714308 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCATG TAGGCGACGC GATGATCGAC GCGATCGCGA GCGCAGGCGT CCGACGGCTC
TACACCGTGC CCGGCGAGAG CTTCTTGGAG GTGCTCGACG CCGCCGACCG GCACCCCGCG
CTCCGCCAGT TCTCCACCCG GCACGAGTCG GGCGCCTCGT TCATGGCCGA CGCGGACGCC
AAGACGTCCG GCGTGCCCGC CGTCGCGATG GCCACCCGGG GTCCGGGCGC GGCGAACCTC
AGCATCGGCG TGCACACCGC TCACCAGGAC GGCACGCCCA TGCTGGTTCT GATCGGGGAC
GTGGAGACGC CGCGGATCTT CCGCGGCGCC TTCCAGGAGG TCGATCTGCC GGCGTTCTAC
CGGCCGATCA CCAAGGCGGC CATGACCGCC CGCCGCGGGG ACCGGCTGCC CGAGATGGTG
ACCGACGCGC TCCGGATCGC AGTCTCCGGA CGCCCCGGCC CGGTCATGAT CTCGCTGCCC
GCCGACCTGC TCGCGGAAGA GTTCACCGGG CCTGCGCCGG CGCCGCTCGC GCCCGTCGCG
CCCGCCGGAT GTCCCCCCGA GACCGTCCGC CGGCTGCGGA GCACCCTGGA ACGGGCGCAG
CGACCGGTGG TCATCGCCGG CGCGGGCGTT CGCCACGCCA CCGACCGCCT CGTCGCGCTC
TGCGAGGCCT ACGGTCTCGG CGTGTACGCC GCGATGCGAC GGCAGGACGT CTTCCCCAAC
GACCACCCGC TCTACCTCGG CCACCTCGGT GTCTCGCCCG CGCCCGGCAC CGTGGACGCG
CTCCGCGAGG CCGACGTGGT GCTGATCCTC GGCGCTGCGC TGGACCAGAT GACGACCCAG
CAGTTCACGC TGCCCGCCGC CTCGGCGCAC CGGATCCACG TCGACGCCGA TCCGCTCACC
CTCGGCGCCG GCCTGCCCGT CGACGAGGCT GTCGTCGCCG AGCCGCGCGA GCTGATCGAG
GCGCTGCTAG CCGAACCGCC CACCGCGCCG CACCGGGCCT GGGACGCCGC GCACCGACGG
TTCCTGGAGT CGACATGCGC CCCCCCGCGC ACCCCGGCCC GGGGCTGCGA CCCCGGTGCT
GTGATCGAGG CCATGAAGCG CGCGTGGCCC GCCGACACGA TCGTCACCAG CGACGCGGGC
AACTTCTCGG GATTCCTCCA CCAGTACTGG CGGTTCACGA CCCCCCGCAG CCAGGCCGCG
CCCATCAACG GCGCGATGGG CTATGCCGTG CCAGGCGCCG TCGGCGCCAA GGCTGCCTCC
CCCGACCGGC ACGTGCTCGG CGTGGTCGGC GACGGTGGCT TCCTGATGAC CGGCAGCGAG
GTCGAGACCG CCGTGCGCTA CGGCCTGCCG CTGACGATCG TCGTCCTGCG CAACGGGCTC
TACGGCACGA TCGCGATGCA CCAGGCCCAG GAGATGGGCC GCCTGTCGGC CGTCGACATC
GGCGACGTGG ACCTCGCGGC ATACGGCCGC AGCCTCGGCG CGGAGGGCAT CACGGTCGAG
GAGCCGGGTC AGCTCGACGA GGCCATGCGC ACTGCCGCGA CCAGCGATGC GGTCACCGTC
GTCGACGTCG TCACCGACCC GGACCTCATC ACCGCGTCCG GCCGGCTCTC GGAGATGTTC
CAGACCTCCT GA
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| Protein sequence | MPHVGDAMID AIASAGVRRL YTVPGESFLE VLDAADRHPA LRQFSTRHES GASFMADADA
KTSGVPAVAM ATRGPGAANL SIGVHTAHQD GTPMLVLIGD VETPRIFRGA FQEVDLPAFY
RPITKAAMTA RRGDRLPEMV TDALRIAVSG RPGPVMISLP ADLLAEEFTG PAPAPLAPVA
PAGCPPETVR RLRSTLERAQ RPVVIAGAGV RHATDRLVAL CEAYGLGVYA AMRRQDVFPN
DHPLYLGHLG VSPAPGTVDA LREADVVLIL GAALDQMTTQ QFTLPAASAH RIHVDADPLT
LGAGLPVDEA VVAEPRELIE ALLAEPPTAP HRAWDAAHRR FLESTCAPPR TPARGCDPGA
VIEAMKRAWP ADTIVTSDAG NFSGFLHQYW RFTTPRSQAA PINGAMGYAV PGAVGAKAAS
PDRHVLGVVG DGGFLMTGSE VETAVRYGLP LTIVVLRNGL YGTIAMHQAQ EMGRLSAVDI
GDVDLAAYGR SLGAEGITVE EPGQLDEAMR TAATSDAVTV VDVVTDPDLI TASGRLSEMF
QTS
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