Gene Noca_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0033 
Symbol 
ID4598387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp36843 
End bp37760 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content73% 
IMG OID639774648 
Productdihydrodipicolinate synthetase 
Protein accessionYP_921270 
Protein GI119714305 
COG category[M] Cell wall/membrane/envelope biogenesis
[E] Amino acid transport and metabolism 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCG AGGAGCTCAG ACCCCACCTG GCGGGCGTCG CGTCGGTGGC GATCACGCCG 
TTCGACGAGG ACCGGCGCGT GGACGAGCGG GGGACGCGCG CGGTGGTCGA GTACCTCGAC
CAGGGCGGCA CCGACACCCT GGTGGTGTGC GGCGGCACCG GGGAGTTCTA CGCCCTCACG
CCTGCGGAGC GTCGGCAGGT GGTCGAGGTC GCCGCGGCCG CCGTCCAGCG TGCGCCGCTC
GTCGTGTCCG TGGGACTCGA CGCGGTCGGC GCGGCCGAGG CCGCCCGGCA CGCCGAGGAC
GCGGGGGCGG CCGGCATCAT GGTCCACCAG CCGATCCATC CCTACACCCA CCCCGACGGC
CTGCGACGGT ACTACGACGA GATCTGCTCA GCAGTCTCCA TCGGTGTGGT CGCGTACGTC
CGAGACCCGC GCGTGGGCGC CGATCTGCTC GGCGACGTCC TGGCCCACGA CAACGTCGTC
GCGGTGAAGT ACGCCGTCAA CGACGTCCGT CGGTTCGCCA ACCTGAGGCG TGACACTCCT
CACAGCGGCA CCGTCGAGTG GGTCTGCGGG AGCGCAGAGG CGTGGGCTCC CTTCTTCTGG
GTGGCCGGCG CGACCGGGTT CACCTCCGGG CTGGCGAACT TCGCGATCGA GGAGGCGCTC
GGCATGCGCG CCGCCCTCGT GTCGGGCGAC GTGGAGCGGA TCCGTGCGAC GTGGGAGCGC
CTGGCCGGCG TCGAGGACCT GCGCTCGCGC GGGGACGACG CGAACAACAT CGCGGTCCTC
AAGGCCGGGA CCTGCCGGCT CGGTCTGACC ACGGCGGTGG TGCGGCCGCC GCTCCGGCCG
CTGCCGGAGG ACCACGACGC GGAGCTGGGG CTCATCCTCG AGGGATGGAA GAACTCGCCA
CGACCGGGGG CCGGGTGA
 
Protein sequence
MKPEELRPHL AGVASVAITP FDEDRRVDER GTRAVVEYLD QGGTDTLVVC GGTGEFYALT 
PAERRQVVEV AAAAVQRAPL VVSVGLDAVG AAEAARHAED AGAAGIMVHQ PIHPYTHPDG
LRRYYDEICS AVSIGVVAYV RDPRVGADLL GDVLAHDNVV AVKYAVNDVR RFANLRRDTP
HSGTVEWVCG SAEAWAPFFW VAGATGFTSG LANFAIEEAL GMRAALVSGD VERIRATWER
LAGVEDLRSR GDDANNIAVL KAGTCRLGLT TAVVRPPLRP LPEDHDAELG LILEGWKNSP
RPGAG