Gene Noca_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0023 
Symbol 
ID4598376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp25454 
End bp26899 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content77% 
IMG OID639774637 
Productprotein kinase 
Protein accessionYP_921260 
Protein GI119714295 
COG category[K] Transcription
[T] Signal transduction mechanisms
[R] General function prediction only
[L] Replication, recombination and repair 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCGA CACCGGACCA GGGCCACGGC TTCGCCGACG CCGAGCACCG CTACCGCCTC 
GACTCCCGGA TCGCCACCGG CGGCATGGGC GAGGTCTGGC GCGGCACCGA CACCACGCTG
GGCCGTCAGG TCGCGGTCAA GCTGCTCAAG AACGAGTACG CCGACAACCC GTCGTTCCGC
ACCCGCTTCG AGACCGAGGC GCAGCACGCC GCCTCGCTGC ACCACCCCAA CATCGCCGCC
GTCTACGACT TCGGCGAGGC CCCCGCCGCC GACGGGTCCG GGGTGCAGCG GCCGTTCCTG
GTGATGGAGC TCGTCGACGG GCAGCCGCTC TCCGCGCTGC TGCGACCCGG GGCGCCGATG
GACCCGGACG CCGTGCGCGA GCTGCTCGCC CAGGCGGCCG ACGGCCTGGC CGCCGCCCAC
GCGGCCGGGA TCGTGCACCG CGACGTCAAG CCGGCCAACC TGCTGGTGAC GCCCGACCGG
CAGGTCAAGA TCACCGACTT CGGGATCGCG CGCGCCGCCG AGGGGATCGG GCTGACCGGG
ACCGGCGAGG TGATGGGCAC CCCGCAGTAC CTCTCCCCGG AGCAGGCCCA GGGTCAGACG
GCAACGCCCG CCTCGGACGT CTACTCCCTC GGCGTGGTCG CCTTCGAGTG CCTCGCCGGC
CGCCGGCCGT TCGTCGCGGA CACGGCCGTC GCCACGGCGC TGGCCCACCT GCGCGAGCCG
GTGCCCCCGC TGCCGGAGTC GGTCCCGGCC GACCTGGCCG CCGTCGTACG CCGCGCGCTC
GCGAAGCTGC CCCAGGACCG GTTCGCCGAC GGCGCGGCCC TGGCCGCCGC CCTGCGCGAC
CCGGCCACGG CGGTCACCGA GCTCGGTCCT CCGGTCGAGC ACGACCACAC CCGGGTGCTG
CCCGGCGTGG CCGGCGTCCT CCCTGCTGAG CCCACGCCGC TGCCCGGCCC GGTCGCCGGC
CATGTCCCGG ACCCGCCGCG GGTGCGCCGG CGCAACGCCC TGTGGCCGGT GCTGGCGGTG
CTGGCCCTGG TCGCCGTCGC CGTGATCGTC GTCCTGCTCG TCGCGGAGGG CATCGGGTCC
GACGGCCCGA CCGACGAGCC CACCCGCTCG CCCCAGCAGA GCCGCAGCAC GCAGCCCACC
TCCGAGCCCC CGTCGTCGCA GCCCACGTCG CCGCTGCCGT CCTCCGAGCC CACGTCGGCG
CCTCCGTCCT CCGAGCCCAC GTCGGCGCCG CCGTCCTCCG AGCCCACCTC CGCCACGCCG
ACACCGACGC CCACGCCGAC GGCCACGGAC TCCGGTGCAC CGGTCGCGCC GTCGCAGTCC
GCCACCGGCG CGGCCGCCTC CGAGCCGGCC GCCCCCGACT CGTCCGCCAG CAGGCCCGTC
GCCGGACCCG GCGGTCCGTC CACCAGCCCG TCCACGAGCA GCCAAGGCGA GGTCGACCGT
CGATGA
 
Protein sequence
MTSTPDQGHG FADAEHRYRL DSRIATGGMG EVWRGTDTTL GRQVAVKLLK NEYADNPSFR 
TRFETEAQHA ASLHHPNIAA VYDFGEAPAA DGSGVQRPFL VMELVDGQPL SALLRPGAPM
DPDAVRELLA QAADGLAAAH AAGIVHRDVK PANLLVTPDR QVKITDFGIA RAAEGIGLTG
TGEVMGTPQY LSPEQAQGQT ATPASDVYSL GVVAFECLAG RRPFVADTAV ATALAHLREP
VPPLPESVPA DLAAVVRRAL AKLPQDRFAD GAALAAALRD PATAVTELGP PVEHDHTRVL
PGVAGVLPAE PTPLPGPVAG HVPDPPRVRR RNALWPVLAV LALVAVAVIV VLLVAEGIGS
DGPTDEPTRS PQQSRSTQPT SEPPSSQPTS PLPSSEPTSA PPSSEPTSAP PSSEPTSATP
TPTPTPTATD SGAPVAPSQS ATGAAASEPA APDSSASRPV AGPGGPSTSP STSSQGEVDR
R