| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0018 |
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| Symbol | |
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| ID | 4598371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 19941 |
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| End bp | 20861 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639774632 |
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| Product | rhomboid family protein |
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| Protein accession | YP_921255 |
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| Protein GI | 119714290 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.417524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCGAAC ACGCGACGCC CCCGGCCGGG GTGCCGACCT GCTATCGCCA CCCCGGCCGC
GAGGCGCACA TCCGCTGCCA GCGCTGCGAC CGGCCGATCT GCCCGGACTG CATGCGCGAC
GCGGCCGTGG GGTTCCAGTG CCCCGAGTGC GTGGCCGAAG GCCGCAAGAG CACCCGTGCC
GGCCGCACCG CCTTCGGCGG GCTGCGGCCG GGCAACGCCG GGACGACGTC GTTCGTCCTG
ATCGGCATCA ACGCCTTCGT CTGGCTGATG ATCCTGGCCA GCGGGGGCAG CTCGAGCCGG
GTGCTGGCCT GGCTGGAGCT GCGGCCGAAC GGGCTGTGCC TCAACGCCGC CGGCGGCTTC
GACACCACCC GGGCCGTGTG CTCGGGCCGG GGCGAGTGGC TGCCCGGTGT GTACGACGGT
GCCTACTGGC AGCTGCTCAC CAGCACGTTC ACGCACGTCC AGCCGTTGCA CATCGCGTTC
AACATGTTCG CGCTCTACGT GCTCGGCCCC CAGCTGGAGC TGGCCATCGG CCGGATCCGC
TTCCTGGCGC TGTACCTGCT CTCCGGGCTC ACCGGGTCCG CGCTGGTCTA CTGGGCGTCC
CCGGAGTTCC AGGCCACCGT CGGCGCCTCC GGCGCGATCT TCGGCCTGAT GGGCGCGCTG
CTCGTGGTGG CCTACAAGAT GCGGGCGAAC ACCCAGCAGA TCCTGATGTG GATCGGCATC
AACTTCGTCT TCACGGTGGT GGTCAGCAAC ATCTCCTGGC AAGGCCACCT GGGCGGGTTC
CTCGGCGGCC TGGTGATCGC CGCGATCCTC GTCTACGCCC CGCGCGGGCC GAAGCGCCCC
TGGTTCCAGG TCTCCGGGCT GGTGCTGGTC GCCGCCCTCA CCGCCGTCGC GGTCGTCCTC
CGCACCGCGG CCCTCGGCTG A
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| Protein sequence | MSEHATPPAG VPTCYRHPGR EAHIRCQRCD RPICPDCMRD AAVGFQCPEC VAEGRKSTRA
GRTAFGGLRP GNAGTTSFVL IGINAFVWLM ILASGGSSSR VLAWLELRPN GLCLNAAGGF
DTTRAVCSGR GEWLPGVYDG AYWQLLTSTF THVQPLHIAF NMFALYVLGP QLELAIGRIR
FLALYLLSGL TGSALVYWAS PEFQATVGAS GAIFGLMGAL LVVAYKMRAN TQQILMWIGI
NFVFTVVVSN ISWQGHLGGF LGGLVIAAIL VYAPRGPKRP WFQVSGLVLV AALTAVAVVL
RTAALG
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