Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0009 |
Symbol | |
ID | 4598362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 12546 |
End bp | 13964 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639774623 |
Product | plasmid pRiA4b ORF-3 family protein |
Protein accession | YP_921246 |
Protein GI | 119714281 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGACG CCAGTCCGGC TGAGGTGCGC GCGGTGCTCG ATGCGCTGGG GAGTGGGCGG GTGTCCAGCA TCTTCGAGAA GCTCGAGCGC GACCAGGCAC CGACCCTGCT GACGGCTCCG GCGCAGGTCC GTGGGTTCCG TGTGCGGTTG GATCTGCACG GGGCCAAGCC TCCGGTGTGG CGGCGGCTGG AGCTGCCCGG CGACCTCAGC CTGCCGCGGG TCCATGCCGC GATCCAGGCG GCAATGGGGT GGACCAACAG CCACCTGCAC CGGTTCCGGA CGGGTTGTGA TCGCAGCTCG GCGTCGTTCG TCACGCAGTT CGACGTCGAT GAGGGTGACG AGGGCACGCT CGAGGACGAC GTGCGGCTCG ACCAGCTGCT CGCCGAGAAC GGCGACGAGC TCTGGTACGA GTACGACTTC GGCGACGGCT GGGATCACGT CTTGGTGGTC GAGGAGGTGC TCGAGGAGCC GCCTTCCACC GTCCGCTGCA CGGGAGGACG GTCGGCCTGC CCGCCCGAGG ACTGCGGCGG TCTCGGTGGC TACCAGGAGC TGGCCGCCTG GGTCCGCAGC GGGTACGACG ACGGGCAGCT CCCCGACGTC TTCGACGATG CGGAGGACGC CCGCGCCTGG CTGCCGCTCG ACTGGCACCC GGACGAATTC GAGGTGGAGG ACGCCGACGC CGCTGTGGCG GCCGCGGCCG CCGAGCTGGT CGCGGTCAGC GGCGAACTCG CCGGGCTGGC CGCGCAGCTC GATCGGCACG GCATCTTGCT GTTGCGGCAG GTGCTGAGCC GCCCCTCCTC CCACGGGCCG ATCGAGGTCG CCGACGCCGA GGCCGGCCGG CTGACCGAGA CCTACCGGAC CTTCCTCGAG GTGATCGGCG ACGGCGTCGC GCTGACCGCC GCCGGTCACC TCCCGCCCGC CGTCGTCGAG AAGTTCGCCG AGCGCAGCGG CATCGCGGAC TGGTGGATCC GCAAGGCCAA CCGTGAGGAC GCCACCCCCC CGGTCGCGAA CGTGCGCGCG GCGGTCCGCT TGCTCGGTCT GGTCAGCGTT CGCAAGGGCC GGCTCGCGCC GACGGCGGCC GCCATCCGAT GCCACCAGGA CCCGCAGGCG CTGCTGCGCC ACATCGTCGA ACGGCTCCCC GTGGGGACCC AGGAGTGGGA GCGCGAGGCG GGCTGGATGG CTCTCGCGGT GGCCGGCAGC GGCGTACCGG CCGAGGACTG GCGCGCCGAG ATCAGCGAGC TGACGTTCGC TCTCGGGTGG CGCGGCGATC CCGGTGACGA CTCGCTGCCG TCGCCGCGCA GCAGGACGCT GAGAGTCCTC GACGATCTGG GTGGTGCGGC GCGCCACCCG TGGGGCCGCA ACGAGGGCGT CGACGCCGCG GTTGCGGCCG TCGCACGCGC GGTCACCCGC CGGGCGTGA
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Protein sequence | MADASPAEVR AVLDALGSGR VSSIFEKLER DQAPTLLTAP AQVRGFRVRL DLHGAKPPVW RRLELPGDLS LPRVHAAIQA AMGWTNSHLH RFRTGCDRSS ASFVTQFDVD EGDEGTLEDD VRLDQLLAEN GDELWYEYDF GDGWDHVLVV EEVLEEPPST VRCTGGRSAC PPEDCGGLGG YQELAAWVRS GYDDGQLPDV FDDAEDARAW LPLDWHPDEF EVEDADAAVA AAAAELVAVS GELAGLAAQL DRHGILLLRQ VLSRPSSHGP IEVADAEAGR LTETYRTFLE VIGDGVALTA AGHLPPAVVE KFAERSGIAD WWIRKANRED ATPPVANVRA AVRLLGLVSV RKGRLAPTAA AIRCHQDPQA LLRHIVERLP VGTQEWEREA GWMALAVAGS GVPAEDWRAE ISELTFALGW RGDPGDDSLP SPRSRTLRVL DDLGGAARHP WGRNEGVDAA VAAVARAVTR RA
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