Gene Tpen_1827 details

Gene Information

• Locus tag: Tpen_1827
• ID: 4602064
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: -
• Start bp: 1770227
• End bp: 1770886
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639774600
• Product: hypothetical protein
• Protein accession: YP_921225
• Protein GI: 119720730

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00475891
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGAGT GGGACGTGGT ACAGCTCTTC CAGCAGGTCG TAATCGAGAT AGCAGCGCTG 
GCACCCAAGG TAGGCCTGGC TACGCTCATA CTTTTCGTTA CGCTCCTCGT AGTAAAGCTC 
GTCAATAAGA GCATAAGGTG GCTGGTGAGC GTCGCCAGGC TGGACGAGTA CTTGAGGAAA 
AGCCTCCCCG AGGGCACCAG GATACCTCTG AGCACGCTAC TCGTGCTCGT CGCGGACGCG 
GGTATCTTAA CCTCCTCTGC CGCGCTCGTG GTCAGAGTCT TCGTGCCGGA GTACTCTCAG 
GCCTACCGCG AGGCACTATC CTACATATCC AGGATTGGAA GCGTGGCTGT TCTCTCGCTG 
TTCTCGTTCG TCGTGATAGA CGCGCTAGTG AAGTCGATGC GTATGGAGAG GAAGACGGAG 
AGGTTCTTCG TCATGATGAG CCTGCTCGTC GTAACACTGC TCATAGTCGA CCTCGCCTCT 
CTGAGCAACG AGATAAAACT GGCGTTGGCC CTTGGAATAG CCATAGGGAT AGGCTTCCTG 
GTGGGAGCGT TTGCGGCTTG GGCGTTCTTC GGCGAATACC TCGACGCGCT CGTACGCGTG 
AGGACTGGGC AACCGGGCTT GGAAAGAGAG AAGAACCTAC CGGAGGACAC GGAGGACTAG 

 

Protein sequence

MPEWDVVQLF QQVVIEIAAL APKVGLATLI LFVTLLVVKL VNKSIRWLVS VARLDEYLRK 
SLPEGTRIPL STLLVLVADA GILTSSAALV VRVFVPEYSQ AYREALSYIS RIGSVAVLSL 
FSFVVIDALV KSMRMERKTE RFFVMMSLLV VTLLIVDLAS LSNEIKLALA LGIAIGIGFL 
VGAFAAWAFF GEYLDALVRV RTGQPGLERE KNLPEDTED