| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1813 |
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| Symbol | |
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| ID | 4602050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1755730 |
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| End bp | 1756830 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639774586 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_921211 |
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| Protein GI | 119720716 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00420003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGGAGAT GCGTTTTTCG CGCGTCGGGG AGGAACGTGA AGGCTAAGGT TTGGCGAGTG
GATCCCTCGG AGCCTGATGC TAAGAGCATC GAGGAGGCGG CGTCCATACT CAGGAAGGGG
GGCGTGGTAG CCTTCCCCAC GGAGACCGTG TACGGGCTTG GCGCCGTGTA CCATATGCGT
GACGCGGTTA TCAGGGTGTT CAAGGTTAAG AGGAGGCCCC CCGACAACCC GCTCATACTG
CACATTTCGA GCTTTTCGCA AATATACACG CTGGCATCCG AGGTCCCCGA GGCTGTGCAC
AGGCTCGCAG AGAAGTTCTG GCCCGGACCC CTGACAGTGG TCCTCCCGAA GACGAGCAGG
GTTCCCTACG AGGTTACCGG GGGCCTCGAG AAGGTTGCCG TCCGGATGCC GGCGCACAAC
GTCGCGCTGA GGCTGATAGA GGCTGTCGGA GACCCTATCG CGGCTCCCAG CGCGAACCTA
TCCGGGAGAC CTTCGCCGAC CACAGCCCAG CACGTTCTAG CCGATCTAGG CGACGAGATA
GACGGCGTGC TCGACGCCGG GGAGACACTG TACGGCGTTG AAAGCACGGT GATAGACCTC
ACCGCCGACC CCCCTGTTCT CCTGCGCCCC GGGGCGGTGC CATTAGAGGA GGTCGAAAAG
GTTCTAGGCA AGGTGTGCGT GCCGGCCTTC GCGCGGGGGC TTGGCGAGGC TGAAAGGGCT
CTCGCGCCCG GCACGAGGTA CCGCCACTAC TCCCCGAGGG CCCAGCTGGT GCTCGTCGAG
CTGAAGGACT ACTCGGACCT ATCCAAGTTG GTAGACAGGG TTAAGAGGCT GGTTGCGGAG
AACGCTGGCA GGGGGTTAAG AGTCGGCGTG CTCTGCACGG ACGAGACCCG GGAGCACTAC
TCGGGGCTGG GTGCTGTCGT CCTGAGCCTC GGGTCTCGGA GAGACCCCTT CGGCATAGCT
AGGAGGCTGT ACTCGTCCTT TAGGGAGATG GACTCACTAG GCGTGGACGT AATCGTCGCG
GAGGGGGTCG ACGAGAGGGG GCTGGGGCTA ACCATCATGA ACAGGATGCG GAAAGCCTCG
ACGAAGAGAG TGGTGGTCTA G
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| Protein sequence | MGRCVFRASG RNVKAKVWRV DPSEPDAKSI EEAASILRKG GVVAFPTETV YGLGAVYHMR
DAVIRVFKVK RRPPDNPLIL HISSFSQIYT LASEVPEAVH RLAEKFWPGP LTVVLPKTSR
VPYEVTGGLE KVAVRMPAHN VALRLIEAVG DPIAAPSANL SGRPSPTTAQ HVLADLGDEI
DGVLDAGETL YGVESTVIDL TADPPVLLRP GAVPLEEVEK VLGKVCVPAF ARGLGEAERA
LAPGTRYRHY SPRAQLVLVE LKDYSDLSKL VDRVKRLVAE NAGRGLRVGV LCTDETREHY
SGLGAVVLSL GSRRDPFGIA RRLYSSFREM DSLGVDVIVA EGVDERGLGL TIMNRMRKAS
TKRVVV
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